Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA polymerase sigma factor 54, interaction

Term: IPR002078  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11478 SustainPine v1.1 853
AutoFact: GTP-binding protein yptv3, putative n=1 Tax=Ricinus communis RepID=B9T5U9_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: member of ras oncogene family-like 3 3.0746e-37
Complete
sp_v1.1_unigene15228 SustainPine v1.1 1477
AutoFact: ras-related protein Rab-18; K07910 Ras-related protein Rab-18 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atrab18 (arabidopsis rab gtpase homolog b18) gtp binding 0.0
Complete
sp_v1.1_unigene37161 SustainPine v1.1 1088
AutoFact: GTP-binding protein yptv3, putative n=1 Tax=Ricinus communis RepID=B9T5U9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: member of ras oncogene family-like 3 0.0
Complete
sp_v1.1_unigene43475 SustainPine v1.1 448
AutoFact: MDN1, midasin homolog (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01G29_OSTTA 1.0e-37
FL-Next: tr=MDN1, midasin homolog (ISS); Ostreococcus tauri. 0.0
Blast2go: type a von willebrand factor domain-containing protein 2.25317e-37
Internal
sp_v1.1_unigene65909 SustainPine v1.1 493
AutoFact: emb2458 (embryo defective 2458); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent metalloprotease 0.0
Internal
sp_v1.1_unigene80523 SustainPine v1.1 605
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 9.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 1.31384e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain