Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene537 SustainPine v1.1 1548
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulator of chromosome condensation family protein 0.0
Complete
sp_v1.1_unigene597 SustainPine v1.1 1385
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulator of chromosome condensation family protein 0.0
C-terminus
sp_v1.1_unigene2380 SustainPine v1.1 775
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.12104e-44
Putative N-terminus
sp_v1.1_unigene2452 SustainPine v1.1 668
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulator of chromosome condensation family protein 0.0
Putative C-terminus
sp_v1.1_unigene3823 SustainPine v1.1 496
• AutoFact: RCC1 domain containing protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: regulator of chromosome condensation family protein 7.13556e-28
C-terminus
sp_v1.1_unigene4005 SustainPine v1.1 1544
• AutoFact: Ran GTPase binding protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ran gtpase binding 0.0
Putative Complete
sp_v1.1_unigene4425 SustainPine v1.1 2273
• AutoFact: Protein RCC2, putative n=1 Tax=Ricinus communis RepID=B9R853_RICCO 0.0
• FL-Next: tr=Protein RCC2, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene4632 SustainPine v1.1 324
• AutoFact: RCC1 domain containing protein 4.0e-06
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: predicted protein [Physcomitrella patens subsp. patens] 2.74467e-11
Internal
sp_v1.1_unigene5725 SustainPine v1.1 1739
• AutoFact: RCC1 and BTB domain-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulator of chromosome expressed 0.0
C-terminus
sp_v1.1_unigene10948 SustainPine v1.1 1935
• AutoFact: UVR8; UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene12069 SustainPine v1.1 463
• AutoFact: Polygalacturonase n=1 Tax=Persea americana RepID=PGLR_PERAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polygalacturonase 0.0
Internal
sp_v1.1_unigene12254 SustainPine v1.1 567
• AutoFact: CCR3; CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3); kinase 1.0e-15
• FL-Next: sp=Putative serine/threonine-protein kinase-like protein CCR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rtx family exoprotein 5.50332e-24
Internal
sp_v1.1_unigene18101 SustainPine v1.1 1474
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene18162 SustainPine v1.1 377
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.95938e-43
Putative C-terminus
sp_v1.1_unigene18466 SustainPine v1.1 1484
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene20021 SustainPine v1.1 389
• AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene21951 SustainPine v1.1 2766
• AutoFact: RCC1 and BTB domain-containing protein, putative 0.0
• FL-Next: tr=Os12g0284000 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: regulator of chromosome expressed 0.0
Complete
sp_v1.1_unigene26780 SustainPine v1.1 403
• AutoFact: uvb-resistance protein uvr8, putative 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uvb-resistance protein 2.25939e-21
Internal
sp_v1.1_unigene27540 SustainPine v1.1 324
• AutoFact: Ran GTPase binding protein, putative 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.99509e-39
Internal
sp_v1.1_unigene29363 SustainPine v1.1 2074
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain