Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Uncharacterised protein family UPF0497, trans-membrane plant

Term: IPR006702  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene64639 SustainPine v1.1 520
• AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 4.0e-30
• FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u4971_picsi ame: full=upf0497 membrane protein 1 6.58479e-30
C-terminus
sp_v1.1_unigene78662 SustainPine v1.1 677
• AutoFact: DUF588 domain containing protein 2.0e-25
• FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u4971_picsi ame: full=upf0497 membrane protein 1 3.75661e-17
C-terminus
sp_v1.1_unigene80478 SustainPine v1.1 374
• AutoFact: DUF588 domain containing protein 9.0e-11
• FL-Next: sp=Casparian strip membrane protein 1; Picea glauca (White spruce) (Pinus glauca). 0.0
N-terminus
sp_v1.1_unigene89999 SustainPine v1.1 308
• AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 3.0e-24
• FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: integral membrane family protein 6.34656e-24
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain