Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene955 SustainPine v1.1 2418
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene2667 SustainPine v1.1 2697
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene3873 SustainPine v1.1 3647
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene5661 SustainPine v1.1 1478
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7495 SustainPine v1.1 2295
• AutoFact: dead box ATP-dependent RNA helicase, putative; K13179 ATP-dependent RNA helicase DDX18 [EC:3.6.4.13] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene10101 SustainPine v1.1 1460
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene10741 SustainPine v1.1 1718
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene14952 SustainPine v1.1 2025
• AutoFact: Eukaryotic initiation factor 4A-1 n=14 Tax=Magnoliophyta RepID=IF4A1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15122 SustainPine v1.1 1542
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15214 SustainPine v1.1 2062
• AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15639 SustainPine v1.1 1927
• AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene18216 SustainPine v1.1 807
• AutoFact: Eukaryotic initiation factor 4A-13 (Fragment) n=5 Tax=core eudicotyledons RepID=IF413_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
N-terminus
sp_v1.1_unigene20352 SustainPine v1.1 668
• AutoFact: DEAD box RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Internal
sp_v1.1_unigene21724 SustainPine v1.1 830
• AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene23039 SustainPine v1.1 1096
• AutoFact: Caltractin n=1 Tax=Atriplex nummularia RepID=CATR_ATRNU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: caltractin 0.0
Complete
sp_v1.1_unigene27936 SustainPine v1.1 1152
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_PHAAU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene28535 SustainPine v1.1 1934
• AutoFact: ATP-dependent RNA helicase dhh1; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29794 SustainPine v1.1 1703
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene32294 SustainPine v1.1 631
• AutoFact: ATP-dependent rRNA helicase spb4 n=2 Tax=Andropogoneae RepID=B6SPG8_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box 0.0
Internal
sp_v1.1_unigene38531 SustainPine v1.1 421
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain