Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene31090 SustainPine v1.1 1158
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Complete
sp_v1.1_unigene35333 SustainPine v1.1 553
AutoFact: PpMADS-S; MIKCC MADS-domain protein PpMADS-S 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein -s 1.89559e-31
N-terminus
sp_v1.1_unigene38249 SustainPine v1.1 786
AutoFact: PPMC6; MIKCC MADS-domain protein PPMC6 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box protein 0.0
Putative Complete
sp_v1.1_unigene38491 SustainPine v1.1 779
AutoFact: PPMC6; MIKCC MADS-domain protein PPMC6 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box protein 0.0
Complete
sp_v1.1_unigene41991 SustainPine v1.1 347
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 1.00053e-42
FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: b-class mads-box transcription factor 1.79506e-42
Internal
sp_v1.1_unigene43097 SustainPine v1.1 517
AutoFact: MADS-box transcription factor n=3 Tax=Spermatophyta RepID=Q8LKX2_9SPER 1.0e-33
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box transcription factor 2.12492e-33
N-terminus
sp_v1.1_unigene48405 SustainPine v1.1 336
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene48625 SustainPine v1.1 491
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 2.0e-25
FL-Next: tr=MADS3 protein; Thujopsis dolabrata (Hiba arborvitae) (Platycladus dolabrata). 0.0
Blast2go: mads-domain transcription factor 3.37213e-25
N-terminus
sp_v1.1_unigene50264 SustainPine v1.1 268
AutoFact: Isoform 2 of MADS-box transcription factor 13 n=1 Tax=Oryza sativa Japonica Group RepID=Q2QW53-2 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.04615e-14
Internal
sp_v1.1_unigene59898 SustainPine v1.1 587
AutoFact: Putative MADS domain transcription factor GGM1 n=1 Tax=Gnetum gnemon RepID=Q9XGK6_GNEGN 2.0e-21
FL-Next: tr=Transcription factor, MADS-box; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: mads-box protein agl14 1.2349e-21
Complete
sp_v1.1_unigene59988 SustainPine v1.1 1193
AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SED9_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Complete
sp_v1.1_unigene61180 SustainPine v1.1 782
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein 0.0
Complete
sp_v1.1_unigene68964 SustainPine v1.1 435
AutoFact: Type I MADS-domain transcription factor n=4 Tax=Selaginella moellendorffii RepID=D8R9I8_SELML 0.0001
FL-Next: Isoform 2 of MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain