Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1764 SustainPine v1.1 1660
AutoFact: similar to TBP-associated factor 15 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.86995e-34
Complete
sp_v1.1_unigene2330 SustainPine v1.1 1684
AutoFact: zinc finger protein 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v1.1_unigene3976 SustainPine v1.1 1217
AutoFact: Elongation factor 1-alpha, putative n=1 Tax=Ricinus communis RepID=B9SPP6_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
N-terminus
sp_v1.1_unigene4219 SustainPine v1.1 1633
AutoFact: zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene7417 SustainPine v1.1 1054
AutoFact: ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14); zinc ion binding [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene8697 SustainPine v1.1 1225
AutoFact: RNA-binding protein, putative; K13094 RNA-binding protein 5/10 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene9692 SustainPine v1.1 1612
AutoFact: RING-H2 finger protein ATL1Q, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl1q 0.0
Complete
sp_v1.1_unigene11087 SustainPine v1.1 607
AutoFact: similar to Rhomboid domain containing 1; K09651 rhomboid domain-containing protein 1 [EC:3.4.21.-] 6.0e-05
Coding
sp_v1.1_unigene12996 SustainPine v1.1 599
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v1.1_unigene14406 SustainPine v1.1 868
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Internal
sp_v1.1_unigene22574 SustainPine v1.1 2227
AutoFact: binding / zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p53 binding 0.0
Complete
sp_v1.1_unigene27939 SustainPine v1.1 789
AutoFact: Drf_FH1 multi-domain protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.94602e-39
Complete
sp_v1.1_unigene35205 SustainPine v1.1 833
AutoFact: zinc finger (Ran-binding) family protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] 4.0e-34
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase zeta catalytic 1.05635e-38
Internal
sp_v1.1_unigene37016 SustainPine v1.1 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: hypothetical protein OsJ_23908 [Oryza sativa Japonica Group] 4.17406e-12
Internal
sp_v1.1_unigene46260 SustainPine v1.1 308
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-22
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase zeta catalytic 4.50061e-22
Internal
sp_v1.1_unigene54783 SustainPine v1.1 589
AutoFact: histone deacetylase hda1, putative 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 1.40298e-25
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain