Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Extracellular ligand-binding receptor

Term: IPR001828  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene6968 SustainPine v1.1 309
AutoFact: glutamate-gated kainate-type ion channel receptor subunit GluR5 1.0e-18
FL-Next: sp=Glutamate receptor 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 3.52798e-19
Internal
sp_v1.1_unigene38617 SustainPine v1.1 539
AutoFact: Glutamate-gated kainate-type ion channel receptor subunit GluR5 n=1 Tax=Populus trichocarpa RepID=B9IAE8_POPTR 6.0e-35
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 1.62083e-35
Internal
sp_v1.1_unigene42549 SustainPine v1.1 313
AutoFact: Unassigned protein
FL-Next: sp=Glutamate receptor 2.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: unnamed protein product [Vitis vinifera] 3.79073e-13
Internal
sp_v1.1_unigene43463 SustainPine v1.1 706
AutoFact: Glutamate-gated kainate-type ion channel receptor subunit GluR5 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-33
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor 3 3.67747e-33
N-terminus
sp_v1.1_unigene44339 SustainPine v1.1 254
AutoFact: ATGLR3.5 (GLUTAMATE RECEPTOR 3.5); intracellular ligand-gated ion channel 5.0e-18
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 8.1691e-19
Internal
sp_v1.1_unigene45782 SustainPine v1.1 309
AutoFact: Glutamate-gated kainate-type ion channel receptor subunit GluR5 n=1 Tax=Populus trichocarpa RepID=B9IAE8_POPTR 6.0e-28
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 9.32815e-28
Internal
sp_v1.1_unigene46612 SustainPine v1.1 325
AutoFact: ATGLR3.5 (GLUTAMATE RECEPTOR 3.5); intracellular ligand-gated ion channel 2.0e-31
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 2.57751e-33
Internal
sp_v1.1_unigene51229 SustainPine v1.1 357
AutoFact: Putative Avr9/Cf-9 rapidly elicited protein 141 n=2 Tax=Oryza sativa RepID=Q69L11_ORYSJ 7.0e-24
FL-Next: sp=Glutamate receptor 2.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: avr9 cf-9 rapidly elicited protein 141 1.4071e-23
Internal
sp_v1.1_unigene83960 SustainPine v1.1 645
AutoFact: Glutamate-gated kainate-type ion channel receptor subunit GluR5 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GPQ9_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain