Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase, subunit 2

Term: IPR015712  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene5450 SustainPine v1.1 2667
AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Complete
sp_v1.1_unigene6264 SustainPine v1.1 794
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene10042 SustainPine v1.1 1114
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Complete
sp_v1.1_unigene12238 SustainPine v1.1 242
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 4.0e-28
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv 7.12484e-28
Internal
sp_v1.1_unigene13814 SustainPine v1.1 444
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8T979_SELML 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.77124e-42
C-terminus
sp_v1.1_unigene17615 SustainPine v1.1 540
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GLY1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i 0.0
Putative N-terminus
sp_v1.1_unigene17794 SustainPine v1.1 1126
AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Internal
sp_v1.1_unigene19566 SustainPine v1.1 434
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5Q2_PHYPA 2.0e-11
FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 4.65058e-11
N-terminus
sp_v1.1_unigene27048 SustainPine v1.1 3349
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SVH7_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta 2; Pinus lambertiana (Sugar pine). Plastid; Chloroplast. 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene27270 SustainPine v1.1 673
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-36
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 5.4755e-36
Internal
sp_v1.1_unigene27509 SustainPine v1.1 939
AutoFact: DNA-directed RNA polymerase n=6 Tax=Andropogoneae RepID=C5Y8Y9_SORBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
sp_v1.1_unigene31218 SustainPine v1.1 440
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase D subunit 2a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase iv 0.0
Internal
sp_v1.1_unigene32693 SustainPine v1.1 1195
AutoFact: DNA-directed RNA polymerase (Fragment) n=8 Tax=Coniferales RepID=Q6Q2T8_SEQSE 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Internal
sp_v1.1_unigene35149 SustainPine v1.1 539
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene36390 SustainPine v1.1 345
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 2.69049e-43
N-terminus
sp_v1.1_unigene37804 SustainPine v1.1 567
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX45_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Larix decidua (European larch). Plastid; Chloroplast. 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene38514 SustainPine v1.1 758
AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
N-terminus
sp_v1.1_unigene39735 SustainPine v1.1 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
sp_v1.1_unigene41757 SustainPine v1.1 418
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 1.0e-28
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 1.13309e-28
Internal
sp_v1.1_unigene44916 SustainPine v1.1 241
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8S1N7_SELML 2.0e-30
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 4.5097e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain