Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase, subunit 2, domain 6

Term: IPR007120  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene5450 SustainPine v1.1 2667
• AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase ii second largest subunit 0.0
Complete
sp_v1.1_unigene10042 SustainPine v1.1 1114
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase iv second largest subunit 0.0
Complete
sp_v1.1_unigene12238 SustainPine v1.1 242
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 4.0e-28
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Blast2go: rna polymerase iv 7.12484e-28
Internal
sp_v1.1_unigene17615 SustainPine v1.1 540
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GLY1_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase i 0.0
Putative N-terminus
sp_v1.1_unigene27048 SustainPine v1.1 3349
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SVH7_RICCO 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta 2; Pinus lambertiana (Sugar pine). Plastid; Chloroplast. 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene31218 SustainPine v1.1 440
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase D subunit 2a; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase iv 0.0
Internal
sp_v1.1_unigene32693 SustainPine v1.1 1195
• AutoFact: DNA-directed RNA polymerase (Fragment) n=8 Tax=Coniferales RepID=Q6Q2T8_SEQSE 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Blast2go: rna polymerase ii second largest subunit 0.0
Internal
sp_v1.1_unigene35149 SustainPine v1.1 539
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene36390 SustainPine v1.1 345
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase iv second largest subunit 2.69049e-43
N-terminus
sp_v1.1_unigene37804 SustainPine v1.1 567
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX45_VITVI 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Larix decidua (European larch). Plastid; Chloroplast. 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene39735 SustainPine v1.1 402
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Blast2go: rna polymerase iv second largest subunit 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain