Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: F-box domain, Skp2-like

Term: IPR022364  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene39090 SustainPine v1.1 387
AutoFact: Unassigned protein
FL-Next: Isoform 2 of F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 0.0
Blast2go: transferring glycosyl 7.3921e-33
Internal
sp_v1.1_unigene42041 SustainPine v1.1 399
AutoFact: transferase, transferring glycosyl groups n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B21B 8.0e-34
FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor jumonji domain-containing protein 1.51641e-33
N-terminus
sp_v1.1_unigene43350 SustainPine v1.1 660
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 8.10001e-29
Putative N-terminus
sp_v1.1_unigene43459 SustainPine v1.1 343
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 2.21312e-24
Internal
sp_v1.1_unigene43545 SustainPine v1.1 574
AutoFact: F-box family protein 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene44377 SustainPine v1.1 604
AutoFact: AtPP2-B8 (Phloem protein 2-B8); carbohydrate binding 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-b8 (phloem protein 2-b8) carbohydrate binding 0.0
N-terminus
sp_v1.1_unigene45298 SustainPine v1.1 491
AutoFact: F-box domain containing protein 3.0e-06
FL-Next: tr=Os07g0189400 protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v1.1_unigene45736 SustainPine v1.1 507
AutoFact: F-box family protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene53287 SustainPine v1.1 353
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GML3_POPTR 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene56411 SustainPine v1.1 333
AutoFact: F-box domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.19749e-19
N-terminus
sp_v1.1_unigene57971 SustainPine v1.1 445
AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9GHK1_POPTR 2.0e-30
FL-Next: Isoform 4 of Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 0.0
Blast2go: actin-6 3.49932e-30
Internal
sp_v1.1_unigene58362 SustainPine v1.1 496
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9IL88_POPTR 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v1.1_unigene59664 SustainPine v1.1 561
AutoFact: F-box domain containing protein 1.0e-05
Putative coding
sp_v1.1_unigene60071 SustainPine v1.1 902
AutoFact: F-box family protein 5.0e-30
FL-Next: sp=F-box/LRR-repeat protein At5g63520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 2.92337e-40
N-terminus
sp_v1.1_unigene60209 SustainPine v1.1 540
AutoFact: AtPP2-B15 (Phloem protein 2-B15); carbohydrate binding 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phloem-specific lectin pp2-like protein 3.69516e-29
Putative N-terminus
sp_v1.1_unigene66915 SustainPine v1.1 516
AutoFact: S locus F-box (SLF)-S4D protein [Antirrhinum hispanicum] 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.69735e-27
N-terminus
sp_v1.1_unigene68981 SustainPine v1.1 408
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 7.2578e-20
N-terminus
sp_v1.1_unigene73561 SustainPine v1.1 371
AutoFact: F-box domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.34863e-21
Putative N-terminus
sp_v1.1_unigene75700 SustainPine v1.1 383
AutoFact: HWS; HWS (HAWAIIAN SKIRT); ubiquitin-protein ligase 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.26417e-21
N-terminus
sp_v1.1_unigene76102 SustainPine v1.1 814
AutoFact: F-box domain containing protein 6.0e-06
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain