Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: F-box domain, Skp2-like

Term: IPR022364  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene24776 SustainPine v1.1 315
• AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v1.1_unigene24827 SustainPine v1.1 463
• AutoFact: F-box protein n=1 Tax=Gossypium hirsutum RepID=A3RJX0_GOSHI 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.32762e-37
N-terminus
sp_v1.1_unigene25825 SustainPine v1.1 833
• AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein 0.0
Complete
sp_v1.1_unigene26320 SustainPine v1.1 1874
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB6 n=1 Tax=Pinus taeda RepID=C9EHT0_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB6; Pinus taeda (Loblolly pine). 0.0
• Blast2go: transport inhibitor response 1 0.0
N-terminus
sp_v1.1_unigene26528 SustainPine v1.1 603
• AutoFact: F-box family protein 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v1.1_unigene26797 SustainPine v1.1 636
• AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein gid2 1.3182e-25
Putative Complete
sp_v1.1_unigene27218 SustainPine v1.1 1518
• AutoFact: F-box domain containing protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene28196 SustainPine v1.1 1225
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HSY9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: f-box family protein 0.0
Complete
sp_v1.1_unigene29670 SustainPine v1.1 1529
• AutoFact: F-box family protein n=1 Tax=Citrus trifoliata RepID=B8Y9B5_PONTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Complete
sp_v1.1_unigene30035 SustainPine v1.1 469
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9H772_POPTR 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kelch repeat-containing f-box family protein 8.52949e-37
N-terminus
sp_v1.1_unigene30163 SustainPine v1.1 430
• AutoFact: F-box family protein n=1 Tax=Citrus trifoliata RepID=B8Y9B5_PONTR 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.35638e-26
N-terminus
sp_v1.1_unigene31381 SustainPine v1.1 647
• AutoFact: F-box family protein 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Internal
sp_v1.1_unigene32069 SustainPine v1.1 698
• AutoFact: F-box family protein n=1 Tax=Trifolium repens RepID=D3YBC3_TRIRP 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
N-terminus
sp_v1.1_unigene32330 SustainPine v1.1 1355
• AutoFact: F-box domain containing protein 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unusual floral organs-like protein 0.0
Complete
sp_v1.1_unigene33865 SustainPine v1.1 469
• AutoFact: F-box family protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.04709e-24
Putative N-terminus
sp_v1.1_unigene35268 SustainPine v1.1 569
• AutoFact: F-box family protein 5.0e-05
• FL-Next: sp=F-box/LRR-repeat protein At5g02910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v1.1_unigene35539 SustainPine v1.1 665
• AutoFact: TRANSPORT INHIBITOR RESPONSE 1 protein, putative; K10268 F-box and leucine-rich repeat protein 2/20 9.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 2.85458e-30
Putative N-terminus
sp_v1.1_unigene35540 SustainPine v1.1 429
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GM21_POPTR 8.0e-39
• FL-Next: Isoform 2 of F-box protein SKIP5 OS=Arabidopsis thaliana GN=SKIP5 0.0
• Blast2go: skp1-interacting partner 5 0.0
Complete
sp_v1.1_unigene35671 SustainPine v1.1 950
• AutoFact: F-box family protein [Arabidopsis thaliana] sp|Q9FZK1.1|FBX6_ARATH RecName: Full=F-box only protein 6 gb|AAF99732.1|AC004557_11 F17L21.13 [Arabidopsis thaliana] gb|ABF57281.1| At1g27340 [Arabidopsis thaliana] 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v1.1_unigene36228 SustainPine v1.1 419
• AutoFact: kelch repeat-containing F-box family protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.09879e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain