Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: F-box domain, Skp2-like

Term: IPR022364  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene17957 SustainPine v1.1 2008
AutoFact: F-box family protein 0.0
FL-Next: sp=F-box protein At2g32560; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene18889 SustainPine v1.1 855
AutoFact: F-box domain containing protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.99934e-39
N-terminus
sp_v1.1_unigene18907 SustainPine v1.1 945
AutoFact: ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11); carbohydrate binding 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phloem protein 2-b15 0.0
Putative Complete
sp_v1.1_unigene19428 SustainPine v1.1 632
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 4.0e-18
FL-Next: sp=F-box protein SNE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 5.74799e-18
Complete
sp_v1.1_unigene19489 SustainPine v1.1 426
AutoFact: F-box domain containing protein 9.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v1.1_unigene19573 SustainPine v1.1 1863
AutoFact: F-box domain containing protein 4.0e-07
unknown
sp_v1.1_unigene19687 SustainPine v1.1 438
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 2.43929e-20
N-terminus
sp_v1.1_unigene20570 SustainPine v1.1 1724
AutoFact: F-box family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v1.1_unigene21088 SustainPine v1.1 501
AutoFact: kelch repeat-containing F-box family protein 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 6.23196e-16
N-terminus
sp_v1.1_unigene21695 SustainPine v1.1 1667
AutoFact: Cyclin-like F-box; Galactose oxidase, central [Medicago truncatula] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene22388 SustainPine v1.1 599
AutoFact: F-box domain containing protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v1.1_unigene23134 SustainPine v1.1 460
AutoFact: AtPP2-B15 (Phloem protein 2-B15); carbohydrate binding 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phloem protein 2-b15 1.20992e-35
N-terminus
sp_v1.1_unigene23399 SustainPine v1.1 823
AutoFact: F-box domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v1.1_unigene23523 SustainPine v1.1 1749
AutoFact: F-box family protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.02208e-27
Putative Complete
sp_v1.1_unigene23568 SustainPine v1.1 1465
AutoFact: kelch repeat-containing F-box family protein [Arabidopsis thaliana] sp|Q9M8L2.1|FBK30_ARATH RecName: Full=F-box/kelch-repeat protein At1g80440 gb|AAF27130.1|AC018849_18 unknown protein; 76867-75803 [Arabidopsis thaliana] gb|AAL38703.1| unknown protein [Ar 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 0.0
Complete
sp_v1.1_unigene24050 SustainPine v1.1 1063
AutoFact: F-box domain containing protein 1.0e-05
unknown
sp_v1.1_unigene24150 SustainPine v1.1 1505
AutoFact: F-box domain containing protein 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unusual floral organs-like protein 0.0
Complete
sp_v1.1_unigene24263 SustainPine v1.1 614
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 4.43998e-12
N-terminus
sp_v1.1_unigene24372 SustainPine v1.1 827
AutoFact: Cyclin-like F-box n=1 Tax=Medicago truncatula RepID=Q2HUK0_MEDTR 9.0e-05
FL-Next: Isoform 1 of F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana GN=At3g03360 0.0
Putative N-terminus
sp_v1.1_unigene24470 SustainPine v1.1 2152
AutoFact: F-box family protein [Arabidopsis thaliana] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 3.35505e-32
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain