Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Chlorophyll a/b binding protein domain

Term: IPR023329  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene30323 SustainPine v1.1 850
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: early light-inducible protein 0.0
Complete
sp_v1.1_unigene30892 SustainPine v1.1 1245
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast chlorophyll a b-binding protein 0.0
Complete
sp_v1.1_unigene47683 SustainPine v1.1 320
• AutoFact: Light-harvesting protein of photosystem I n=1 Tax=Chlamydomonas reinhardtii RepID=A8IKC8_CHLRE 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: light-harvesting protein of photosystem i 1.38336e-18
Internal
sp_v1.1_unigene47826 SustainPine v1.1 320
• AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO 4.0e-19
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: light-harvesting chlorophyll a b-binding protein 6.20965e-19
N-terminus
sp_v1.1_unigene58971 SustainPine v1.1 949
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=13 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chlorophyll a b binding 0.0
C-terminus
sp_v1.1_unigene59111 SustainPine v1.1 1137
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=36 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Blast2go: chlorophyll a b-binding protein 0.0
Complete
sp_v1.1_unigene60041 SustainPine v1.1 841
• AutoFact: Early light-inducible protein n=3 Tax=Populus trichocarpa RepID=A9PHM1_POPTR 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: early light-inducible protein 0.0
Complete
sp_v1.1_unigene60112 SustainPine v1.1 692
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Blast2go: chlorophyll a b-binding 0.0
N-terminus
sp_v1.1_unigene63701 SustainPine v1.1 401
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast light harvesting chlorophyll a b binding protein 0.0
C-terminus
sp_v1.1_unigene63718 SustainPine v1.1 318
• AutoFact: LHC I type II chlorophyll binding protein (Fragment) n=1 Tax=Pinus sylvestris RepID=Q8RU80_PINSY 4.0e-20
• FL-Next: tr=Type II chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Blast2go: light-harvesting complex i protein lhca2 7.37631e-20
Internal
sp_v1.1_unigene63789 SustainPine v1.1 574
• AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Blast2go: type iii chlorophyll a b-binding protein 0.0
Internal
sp_v1.1_unigene69363 SustainPine v1.1 388
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=4 Tax=Arabidopsis RepID=PSBS_ARATH 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast chlorophyll a b-binding protein 7.2253e-20
C-terminus
sp_v1.1_unigene75875 SustainPine v1.1 821
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=36 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chloroplast light harvesting chlorophyll a b binding protein 0.0
Putative C-terminus
sp_v1.1_unigene78253 SustainPine v1.1 947
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=10 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chlorophyll a b binding 0.0
Complete
sp_v1.1_unigene78988 SustainPine v1.1 540
• AutoFact: Chlorophyll a/b-binding protein (Fragment) n=1 Tax=Citrus limon RepID=Q84U94_CITLI 3.0e-38
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Blast2go: chloroplast light harvesting chlorophyll a b binding protein 9.76705e-43
Putative C-terminus
sp_v1.1_unigene79129 SustainPine v1.1 458
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chlorophyll a b binding 0.0
Internal
sp_v1.1_unigene79327 SustainPine v1.1 506
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chloroplast light harvesting chlorophyll a b binding protein 0.0
Internal
sp_v1.1_unigene79621 SustainPine v1.1 484
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chlorophyll a-b binding protein 2 0.0
Putative C-terminus
sp_v1.1_unigene84113 SustainPine v1.1 41
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain