Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, MYND-type

Term: IPR002893  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1727 SustainPine v1.1 2127
• AutoFact: programmed cell death protein 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene2292 SustainPine v1.1 1434
• AutoFact: F-box family protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
Putative Complete
sp_v1.1_unigene2361 SustainPine v1.1 1063
• AutoFact: zinc finger (MYND type) family protein / F-box family protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene2664 SustainPine v1.1 905
• AutoFact: UBP17; UBP17 (UBIQUITIN-SPECIFIC PROTEASE 17); cysteine-type endopeptidase/ ubiquitin thiolesterase/ zinc ion binding 4.0e-16
• FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
• Blast2go: ubiquitin-specific protease 16 9.68913e-20
Putative N-terminus
sp_v1.1_unigene3851 SustainPine v1.1 1626
• AutoFact: Histone-lysine N-methyltransferase ATXR2 n=2 Tax=Arabidopsis RepID=ATXR2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: set domain-containing protein 0.0
C-terminus
sp_v1.1_unigene5139 SustainPine v1.1 301
• AutoFact: zinc finger (MYND type) family protein / F-box family protein 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 1.35038e-26
C-terminus
sp_v1.1_unigene6081 SustainPine v1.1 2367
• AutoFact: zinc finger (MYND type) family protein / F-box family protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
Complete
sp_v1.1_unigene9522 SustainPine v1.1 1861
• AutoFact: zinc finger (MYND type) family protein / F-box family protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain