Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ubiquitin supergroup

Term: IPR019955  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene25341 SustainPine v1.1 690
AutoFact: polyubiquitin containing 7 ubiquitin monomers 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene25350 SustainPine v1.1 1125
AutoFact: polyubiquitin containing 7 ubiquitin monomers 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
sp_v1.1_unigene25360 SustainPine v1.1 718
AutoFact: 40S ribosomal protein S27a-2 n=65 Tax=Embryophyta RepID=R27AB_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin extension protein 0.0
Complete
sp_v1.1_unigene25365 SustainPine v1.1 770
AutoFact: polyubiquitin containing 7 ubiquitin monomers 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene26443 SustainPine v1.1 718
AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene26568 SustainPine v1.1 1484
AutoFact: Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene26617 SustainPine v1.1 697
AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene26897 SustainPine v1.1 731
AutoFact: polyubiquitin containing 7 ubiquitin monomers 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene27058 SustainPine v1.1 348
AutoFact: ubiquitin domain containing protein 8.0e-11
FL-Next: sp=Polyubiquitin 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene27085 SustainPine v1.1 2069
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: uv excision repair protein 0.0
Complete
sp_v1.1_unigene27418 SustainPine v1.1 1333
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU96_VITVI 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
sp_v1.1_unigene27712 SustainPine v1.1 1393
AutoFact: MUB6; MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR) 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene28282 SustainPine v1.1 1598
AutoFact: Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene28559 SustainPine v1.1 977
AutoFact: zinc ion binding 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 1.18279e-29
Internal
sp_v1.1_unigene31849 SustainPine v1.1 314
AutoFact: ubiquitin, putative 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein 2.97738e-26
Putative N-terminus
sp_v1.1_unigene32036 SustainPine v1.1 1332
AutoFact: zinc ion binding 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 1.88651e-29
Putative Complete
sp_v1.1_unigene32807 SustainPine v1.1 979
AutoFact: spliceosome associated protein, putative; K12825 splicing factor 3A subunit 1 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.94273e-44
Putative Complete
sp_v1.1_unigene36613 SustainPine v1.1 270
AutoFact: phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein 2.0e-10
FL-Next: tr=Phosphoinositide 4-kinase gamma 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v1.1_unigene58020 SustainPine v1.1 391
AutoFact: Unknown EST 2.0e-14
Putative coding
sp_v1.1_unigene58704 SustainPine v1.1 1296
AutoFact: predicted protein; K08770 ubiquitin C 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain