Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene16222 SustainPine v1.1 1690
AutoFact: spliceosome associated protein, putative; K12825 splicing factor 3A subunit 1 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene16268 SustainPine v1.1 1725
AutoFact: protein binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16281 SustainPine v1.1 1175
AutoFact: predicted protein; K08770 ubiquitin C 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene16379 SustainPine v1.1 1004
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU96_VITVI 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v1.1_unigene16420 SustainPine v1.1 652
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 2.0e-30
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: uv excision repair protein 4.18186e-30
N-terminus
sp_v1.1_unigene16450 SustainPine v1.1 2762
AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphatidylinositol 3-and 4-kinase family protein 0.0
Complete
sp_v1.1_unigene16528 SustainPine v1.1 1503
AutoFact: protein binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16780 SustainPine v1.1 702
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v1.1_unigene17104 SustainPine v1.1 2535
AutoFact: ubiquitin family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene17387 SustainPine v1.1 1053
AutoFact: ubiquitin-like protein 3.0e-23
FL-Next: tr=Ubiquitin family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ubiquitin family protein 3.26663e-28
Complete
sp_v1.1_unigene17920 SustainPine v1.1 150
AutoFact: Polyubiquitin-like (Fragment) n=2 Tax=Eukaryota RepID=Q5K5A7_ORYSA 1.0e-19
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 2.77827e-19
Putative N-terminus
sp_v1.1_unigene19418 SustainPine v1.1 442
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Picea sitchensis RepID=A9NUT3_PICSI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-specific protease 6 0.0
N-terminus
sp_v1.1_unigene19873 SustainPine v1.1 761
AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
sp_v1.1_unigene20556 SustainPine v1.1 1242
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v1.1_unigene20947 SustainPine v1.1 1303
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene20962 SustainPine v1.1 1575
AutoFact: Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene20989 SustainPine v1.1 1217
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v1.1_unigene21388 SustainPine v1.1 307
AutoFact: Ubiquitin, putative n=6 Tax=Eukaryota RepID=A2DGL5_TRIVA 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v1.1_unigene21468 SustainPine v1.1 1036
AutoFact: Ubiquitin family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene21999 SustainPine v1.1 2525
AutoFact: Plant ubiquilin, putative n=1 Tax=Ricinus communis RepID=B9S6T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin family protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain