Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene955 SustainPine v1.1 2418
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene1579 SustainPine v1.1 1410
• AutoFact: Putative chloroplast RNA helicase VDL isoform 1 n=2 Tax=Nicotiana tabacum RepID=Q9FE48_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
N-terminus
sp_v1.1_unigene2208 SustainPine v1.1 3484
• AutoFact: DEAD box RNA helicase (RH26) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Putative Complete
sp_v1.1_unigene2457 SustainPine v1.1 890
• AutoFact: ATP-dependent rRNA helicase RRP3; K01529 [EC:3.6.1.-] 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent rrna helicase rrp3 6.48904e-29
Putative N-terminus
sp_v1.1_unigene2510 SustainPine v1.1 1027
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SM71_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Internal
sp_v1.1_unigene2667 SustainPine v1.1 2697
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene3873 SustainPine v1.1 3647
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene5912 SustainPine v1.1 614
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Internal
sp_v1.1_unigene7492 SustainPine v1.1 1779
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase-like protein 0.0
C-terminus
sp_v1.1_unigene7495 SustainPine v1.1 2295
• AutoFact: dead box ATP-dependent RNA helicase, putative; K13179 ATP-dependent RNA helicase DDX18 [EC:3.6.4.13] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene10101 SustainPine v1.1 1460
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene11308 SustainPine v1.1 2399
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11610 SustainPine v1.1 3666
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene13712 SustainPine v1.1 816
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SS37_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v1.1_unigene13884 SustainPine v1.1 1663
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 57; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: atp-dependent rna helicase 0.0
Complete
sp_v1.1_unigene14952 SustainPine v1.1 2025
• AutoFact: Eukaryotic initiation factor 4A-1 n=14 Tax=Magnoliophyta RepID=IF4A1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15214 SustainPine v1.1 2062
• AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15639 SustainPine v1.1 1927
• AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene18216 SustainPine v1.1 807
• AutoFact: Eukaryotic initiation factor 4A-13 (Fragment) n=5 Tax=core eudicotyledons RepID=IF413_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
N-terminus
sp_v1.1_unigene18234 SustainPine v1.1 597
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain