Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helix-turn-helix, base-excision DNA repair, C-terminal

Term: IPR023170  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2193 SustainPine v1.1 827
AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO 2.0e-24
FL-Next: tr=8-oxoguanine DNA glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 8-oxoguanine dna 3.23396e-24
Putative C-terminus
sp_v1.1_unigene5038 SustainPine v1.1 1330
AutoFact: Endonuclease III, putative; K10773 endonuclease III [EC:4.2.99.18] 0.0
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene6709 SustainPine v1.1 1344
AutoFact: HhH-GPD base excision DNA repair family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] 0.0
FL-Next: tr=HhH-GPD base excision DNA repair family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: gpd base excision dna repair family protein 0.0
Complete
sp_v1.1_unigene7705 SustainPine v1.1 930
AutoFact: endonuclease III, putative (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] 3.0e-38
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: endonuclease iii homologue 5.78182e-39
C-terminus
sp_v1.1_unigene26006 SustainPine v1.1 739
AutoFact: DME; DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase 8.00141e-43
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter 0.0
Internal
sp_v1.1_unigene55004 SustainPine v1.1 491
AutoFact: DNG902; DNA glycosylase 0.0
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain