Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene270 SustainPine v1.1 1204
AutoFact: DRB1501; double-stranded RNA binding protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 0.0
Complete
sp_v1.1_unigene457 SustainPine v1.1 1171
AutoFact: DsRNA-binding protein LH1 n=11 Tax=Brassica RepID=Q5IZK8_BRAOC 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 3.13251e-30
Complete
sp_v1.1_unigene550 SustainPine v1.1 1185
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding protein 6.36638e-41
Putative C-terminus
sp_v1.1_unigene568 SustainPine v1.1 1724
AutoFact: DRB1501; double-stranded RNA binding protein 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 0.0
Complete
sp_v1.1_unigene2063 SustainPine v1.1 1914
AutoFact: Double-stranded RNA binding protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TW99_PHYPA 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 5.32587e-26
Putative Complete
sp_v1.1_unigene2317 SustainPine v1.1 1027
AutoFact: Ribonuclease III, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 6.0e-12
FL-Next: sp=Endoribonuclease Dicer homolog 3b; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dcl3b_orysj ame: full=endoribonuclease dicer homolog 3b ame: full=dicer-like protein 3b short= 3b 2.34351e-15
C-terminus
sp_v1.1_unigene3784 SustainPine v1.1 1905
AutoFact: Ribonuclease III, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
C-terminus
sp_v1.1_unigene5596 SustainPine v1.1 633
AutoFact: DCL901; dicer-like protein; K11592 endoribonuclease Dicer [EC:3.1.26.-] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
C-terminus
sp_v1.1_unigene5629 SustainPine v1.1 1172
AutoFact: CAF protein n=1 Tax=Arabidopsis thaliana RepID=Q56Y50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Complete
sp_v1.1_unigene8476 SustainPine v1.1 734
AutoFact: Ribosomal_S5 domain containing protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.36836e-38
N-terminus
sp_v1.1_unigene10486 SustainPine v1.1 1164
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 5.0e-22
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: double-stranded rna binding 9.062e-22
C-terminus
sp_v1.1_unigene14899 SustainPine v1.1 1083
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s2 0.0
C-terminus
sp_v1.1_unigene16455 SustainPine v1.1 2100
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RH31_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding protein 0.0
Putative Complete
sp_v1.1_unigene19139 SustainPine v1.1 2131
AutoFact: DRB2; DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 2 0.0
Complete
sp_v1.1_unigene20511 SustainPine v1.1 867
AutoFact: DRB2; DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding protein 0.0
N-terminus
sp_v1.1_unigene24006 SustainPine v1.1 1440
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene24079 SustainPine v1.1 1358
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene27146 SustainPine v1.1 706
AutoFact: dsrm domain containing protein 2.0e-07
unknown
sp_v1.1_unigene28426 SustainPine v1.1 1108
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RH31_RICCO 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding 0.0
C-terminus
sp_v1.1_unigene29187 SustainPine v1.1 1026
AutoFact: Endoribonuclease Dicer homolog 1 n=2 Tax=Oryza sativa RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain