Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helicase-associated domain

Term: IPR007502  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2043 SustainPine v1.1 2540
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene2369 SustainPine v1.1 1082
AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX15_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative N-terminus
sp_v1.1_unigene4850 SustainPine v1.1 379
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S355_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Internal
sp_v1.1_unigene4939 SustainPine v1.1 1251
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase domain-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene20387 SustainPine v1.1 714
AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene27178 SustainPine v1.1 1441
AutoFact: ATP-dependent RNA helicase, putative; K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene38861 SustainPine v1.1 493
AutoFact: ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: deih-box rna dna helicase 0.0
Putative N-terminus
sp_v1.1_unigene47419 SustainPine v1.1 196
AutoFact: MEE29; MEE29 (maternal effect embryo arrest 29); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 1.79441e-26
Internal
sp_v1.1_unigene48856 SustainPine v1.1 364
AutoFact: dhx57, fc68d07, si:ch211-250c4.7, wu:fc68d07; DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: deah (asp-glu-ala-asp his) box polypeptide 57 1.21741e-35
Internal
sp_v1.1_unigene49392 SustainPine v1.1 450
AutoFact: ATP-dependent RNA helicase, putative 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase domain-containing protein 1.03976e-42
Internal
sp_v1.1_unigene52906 SustainPine v1.1 213
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 3.79593e-21
Internal
sp_v1.1_unigene55627 SustainPine v1.1 375
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983869 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase domain-containing protein 8.01543e-43
Putative N-terminus
sp_v1.1_unigene56249 SustainPine v1.1 238
AutoFact: ATP-dependent RNA helicase, putative (EC:3.4.22.44) 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 7.49358e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain