Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribosomal protein S1, RNA-binding domain

Term: IPR003029  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1809 SustainPine v1.1 1678
AutoFact: 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR1_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s1 0.0
Complete
sp_v1.1_unigene5760 SustainPine v1.1 1788
AutoFact: DNA-directed RNA polymerase II 19 kDa polypeptide; K03015 DNA-directed RNA polymerase II subunit G 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: rna polymerase ii 0.0
Complete
sp_v1.1_unigene8652 SustainPine v1.1 1042
AutoFact: polyribonucleotide nucleotidyltransferase, putative (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Putative C-terminus
sp_v1.1_unigene11559 SustainPine v1.1 888
AutoFact: polyribonucleotide nucleotidyltransferase, putative (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: PREDICTED: hypothetical protein [Vitis vinifera] 6.1018e-11
Putative C-terminus
sp_v1.1_unigene12018 SustainPine v1.1 1618
AutoFact: S1 RNA-binding domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene30721 SustainPine v1.1 374
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 4.00001e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna helicase 3.97689e-42
Internal
sp_v1.1_unigene54563 SustainPine v1.1 665
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pde312 ptac10 0.0
Internal
sp_v1.1_unigene62645 SustainPine v1.1 394
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: transcription elongation factor spt6 3.90855e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain