Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA-dependent RNA polymerase, eukaryotic-type

Term: IPR007855  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1680 SustainPine v1.1 1817
AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 6 0.0
C-terminus
sp_v1.1_unigene4140 SustainPine v1.1 397
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.0e-39
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 5.35826e-39
Internal
sp_v1.1_unigene4363 SustainPine v1.1 749
AutoFact: RNA-dependent RNA polymerase family protein 5.0e-37
FL-Next: sp=Probable RNA-dependent RNA polymerase 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna-dependent rna polymerase family protein 0.0
Internal
sp_v1.1_unigene4925 SustainPine v1.1 715
AutoFact: RNA-dependent RNA polymerase 6 n=5 Tax=Nicotiana RepID=A9CRC9_TOBAC 0.0
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna-dependent rna polymerase 6 0.0
Internal
sp_v1.1_unigene7240 SustainPine v1.1 556
AutoFact: RNA-directed RNA polymerase-like, putative n=1 Tax=Solanum demissum RepID=Q6L447_SOLDE 1.0e-30
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 2.12887e-30
C-terminus
sp_v1.1_unigene8649 SustainPine v1.1 1211
AutoFact: RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum RepID=Q6L3W8_SOLDE 0.0
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 0.0
C-terminus
sp_v1.1_unigene18376 SustainPine v1.1 572
AutoFact: RNA-dependent RNA polymerase family protein 1.0e-21
FL-Next: sp=Probable RNA-dependent RNA polymerase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase family protein 4.0076e-27
Internal
sp_v1.1_unigene34344 SustainPine v1.1 468
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Nicotiana RepID=C1I213_NICGU 4.06377e-44
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 3.22299e-44
Internal
sp_v1.1_unigene35758 SustainPine v1.1 895
AutoFact: RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida RepID=Q9ZRX3_PETHY 0.0
FL-Next: sp=Probable RNA-dependent RNA polymerase 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna-dependent rna polymerase 0.0
Internal
sp_v1.1_unigene36311 SustainPine v1.1 633
AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 0.0
Internal
sp_v1.1_unigene37383 SustainPine v1.1 1070
AutoFact: RNA-dependent RNA polymerase n=3 Tax=Arabidopsis RepID=Q9LKP0_ARATH 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 6 0.0
C-terminus
sp_v1.1_unigene39681 SustainPine v1.1 517
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 2.0e-35
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 9.20674e-37
Internal
sp_v1.1_unigene40736 SustainPine v1.1 528
AutoFact: RDR905; rna-dependent RNA polymerase 0.0
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna-dependent rna polymerase 0.0
Internal
sp_v1.1_unigene55448 SustainPine v1.1 266
AutoFact: RNA-directed RNA polymerase n=3 Tax=Solanum RepID=Q9ZR58_SOLLC 5.0e-25
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna-polymerase 9.82487e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain