Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, CCHC retroviral-type

Term: IPR013084  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene67517 SustainPine v1.1 681
• AutoFact: CCHC-type zinc finger protein-like n=2 Tax=Oryza sativa RepID=Q6Z6G7_ORYSJ 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleic acid binding protein 1.49935e-36
N-terminus
sp_v1.1_unigene67740 SustainPine v1.1 495
• AutoFact: Unknown EST 7.0e-11
Putative coding
sp_v1.1_unigene68665 SustainPine v1.1 155
• AutoFact: Unknown EST 4.0e-11
unknown
sp_v1.1_unigene69910 SustainPine v1.1 379
• AutoFact: Unknown EST 4.0e-08
Coding
sp_v1.1_unigene73254 SustainPine v1.1 210
• AutoFact: Unknown EST 0.0001
unknown
sp_v1.1_unigene74317 SustainPine v1.1 293
• AutoFact: TT_ORF1 domain containing protein 7.0e-05
Coding
sp_v1.1_unigene75661 SustainPine v1.1 307
• AutoFact: Unassigned protein 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_022696 [Vitis vinifera] 9.45569e-12
Internal
sp_v1.1_unigene77463 SustainPine v1.1 718
• AutoFact: Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9R835_RICCO 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-binding protein 0.0
N-terminus
sp_v1.1_unigene80041 SustainPine v1.1 359
• AutoFact: Unknown EST 5.60519e-45
Coding
sp_v1.1_unigene81640 SustainPine v1.1 542
• AutoFact: Unknown EST 2.0e-22
Coding
sp_v1.1_unigene81818 SustainPine v1.1 438
• AutoFact: Retrotransposon protein n=1 Tax=Zea mays RepID=B6TVF1_MAIZE 0.0001
unknown
sp_v1.1_unigene81838 SustainPine v1.1 375
• AutoFact: Unknown EST 1.0e-22
Putative coding
sp_v1.1_unigene81910 SustainPine v1.1 507
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: copia ltr rider 1.74519e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain