Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, CCHC retroviral-type

Term: IPR013084  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene41001 SustainPine v1.1 684
• AutoFact: NV17307; similar to Gag-Pol 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.67746e-11
Putative Complete
sp_v1.1_unigene41167 SustainPine v1.1 123
• AutoFact: Unknown EST 4.0e-19
unknown
sp_v1.1_unigene41956 SustainPine v1.1 478
• AutoFact: Unknown EST 3.0e-13
Putative coding
sp_v1.1_unigene42611 SustainPine v1.1 489
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 7.29316e-12
Internal
sp_v1.1_unigene42747 SustainPine v1.1 551
• AutoFact: zf-CCHC domain containing protein 1.0e-05
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: hypothetical protein VITISV_024659 [Vitis vinifera] 1.33312e-28
Internal
sp_v1.1_unigene44046 SustainPine v1.1 452
• AutoFact: Emb|CAB86673.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FFY2_ARATH 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc knuckle (cchc-type) family protein 3.36791e-17
Internal
sp_v1.1_unigene47977 SustainPine v1.1 245
• AutoFact: zf-CCHC domain containing protein 7.0e-05
unknown
sp_v1.1_unigene48784 SustainPine v1.1 444
• AutoFact: Splicing factor SF1 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NU04_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: branchpoint-bridging protein 0.0
Internal
sp_v1.1_unigene49257 SustainPine v1.1 168
unknown
sp_v1.1_unigene50074 SustainPine v1.1 90
• AutoFact: Unknown EST 3.0e-11
unknown
sp_v1.1_unigene50314 SustainPine v1.1 203
• AutoFact: zf-CCHC domain containing protein 6.0e-05
Coding
sp_v1.1_unigene50598 SustainPine v1.1 434
• AutoFact: Unknown EST 6.0e-17
unknown
sp_v1.1_unigene51106 SustainPine v1.1 316
• AutoFact: Unknown EST 3.0e-19
Coding
sp_v1.1_unigene52117 SustainPine v1.1 282
• AutoFact: zf-CCHC domain containing protein 0.0001
Putative coding
sp_v1.1_unigene52554 SustainPine v1.1 545
• AutoFact: Putative coat protein n=1 Tax=Blueberry red ringspot virus RepID=Q919G4_9VIRU 5.0e-05
Coding
sp_v1.1_unigene55093 SustainPine v1.1 416
• AutoFact: H0102C09.1 protein n=1 Tax=Oryza sativa RepID=Q25AL5_ORYSA 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene58379 SustainPine v1.1 631
• AutoFact: CYP59; CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding / peptidyl-prolyl cis-trans isomerase; K12735 peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus
sp_v1.1_unigene62057 SustainPine v1.1 479
• AutoFact: zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] emb|CAC05633.1| putative protein [Arabidopsis thaliana] gb|AAM20675.1| putative protein [Arabidopsis thaliana] gb|AAN72214.1| putative protein [Arabidopsis thaliana] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene65301 SustainPine v1.1 293
• AutoFact: Unknown EST 2.0e-06
unknown
sp_v1.1_unigene65901 SustainPine v1.1 436
• AutoFact: zf-CCHC domain containing protein 7.0e-05
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain