Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: U box domain

Term: IPR003613  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene56 SustainPine v1.1 3687
• AutoFact: ubiquitin-protein ligase, putative; K10597 ubiquitin conjugation factor E4 B [EC:6.3.2.19] 0.0
• FL-Next: sp=Probable ubiquitin conjugation factor E4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene1316 SustainPine v1.1 1272
• AutoFact: PUB13 (PLANT U-BOX 13); ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
Internal
sp_v1.1_unigene3852 SustainPine v1.1 1484
• AutoFact: PUB25 (PLANT U-BOX 25); binding / ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q9LT79.1|PUB25_ARATH RecName: Full=U-box domain-containing protein 25; AltName: Full=Plant U-box protein 25 dbj|BAB02462.1| unnamed protein product [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 0.0
Putative Complete
sp_v1.1_unigene4653 SustainPine v1.1 574
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9SUD5_RICCO 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
Internal
sp_v1.1_unigene7511 SustainPine v1.1 1195
• AutoFact: PUB23 (PLANT U-BOX 23); ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q84TG3.1|PUB23_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB23; AltName: Full=Plant U-box protein 23; AltName: Full=U-box domain-containing protein 23 gb|AAO64764.1| At2g3593 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene7603 SustainPine v1.1 2843
• AutoFact: U-box multi-domain protein 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene16765 SustainPine v1.1 759
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 8.96831e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 0.0
N-terminus
sp_v1.1_unigene17049 SustainPine v1.1 2686
• AutoFact: U-box multi-domain protein 2.0e-17
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene20297 SustainPine v1.1 343
• AutoFact: U-box domain containing protein 2.0e-07
Coding
sp_v1.1_unigene21815 SustainPine v1.1 1101
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9RYG1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub26 0.0
N-terminus
sp_v1.1_unigene21942 SustainPine v1.1 2025
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9RU03_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 0.0
Complete
sp_v1.1_unigene22721 SustainPine v1.1 2222
• AutoFact: Pre-mRNA-splicing factor, putative; K10599 pre-mRNA-processing factor 19 [EC:6.3.2.19] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub59 0.0
Complete
sp_v1.1_unigene28082 SustainPine v1.1 912
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 2.44552e-26
Internal
sp_v1.1_unigene28516 SustainPine v1.1 874
• AutoFact: ubiquitin-protein ligase, putative 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: armadillo beta-catenin repeat family protein 4.06377e-44
Internal
sp_v1.1_unigene29361 SustainPine v1.1 1130
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RMH5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: armadillo beta-catenin repeat family protein u-box domain-containing family protein 0.0
N-terminus
sp_v1.1_unigene35328 SustainPine v1.1 860
• AutoFact: PUB9 (PLANT U-BOX 9); ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.33113e-31
Putative N-terminus
sp_v1.1_unigene35847 SustainPine v1.1 573
• AutoFact: Putative serine/threonine protein kinase (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q84P73_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kinase family protein 0.0
Putative C-terminus
sp_v1.1_unigene37675 SustainPine v1.1 660
• AutoFact: PUB9 (PLANT U-BOX 9); ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.14291e-25
N-terminus
sp_v1.1_unigene38416 SustainPine v1.1 500
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T5I0_RICCO 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.99774e-34
Internal
sp_v1.1_unigene38577 SustainPine v1.1 504
• AutoFact: GE14378 gene product from transcript GE14378-RA 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: something that sticks like glue 1.42159e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain