|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v1.1_unigene1253
|
SustainPine v1.1
|
2299
|
|
• AutoFact: rve domain containing protein
|
6.0e-11
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Complete
|
|
sp_v1.1_unigene4288
|
SustainPine v1.1
|
1611
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol identical
|
0.0
|
|
Putative N-terminus
|
|
sp_v1.1_unigene4293
|
SustainPine v1.1
|
1320
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
0.0
|
|
Putative Complete
|
|
sp_v1.1_unigene5449
|
SustainPine v1.1
|
753
|
|
• AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR
|
0.0
|
|
• FL-Next: tr=Integrase, catalytic region; Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides).
|
0.0
|
|
• Blast2go: catalytic region ribonuclease h
|
0.0
|
|
Internal
|
|
sp_v1.1_unigene6073
|
SustainPine v1.1
|
2028
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative Complete
|
|
sp_v1.1_unigene6332
|
SustainPine v1.1
|
1344
|
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
0.0
|
|
C-terminus
|
|
sp_v1.1_unigene7506
|
SustainPine v1.1
|
459
|
|
• AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA
|
2.0e-31
|
|
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: gag pol polyprotein
|
7.32003e-33
|
|
Internal
|
|
sp_v1.1_unigene8415
|
SustainPine v1.1
|
653
|
|
• AutoFact: rve domain containing protein
|
3.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
sp_v1.1_unigene12157
|
SustainPine v1.1
|
1018
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
C-terminus
|
|
sp_v1.1_unigene12410
|
SustainPine v1.1
|
222
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH
|
2.0e-10
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_017862 [Vitis vinifera]
|
7.30491e-12
|
|
Internal
|
|
sp_v1.1_unigene13908
|
SustainPine v1.1
|
799
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
0.0
|
|
Putative N-terminus
|
|
sp_v1.1_unigene13985
|
SustainPine v1.1
|
740
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404
|
0.0
|
|
Internal
|
|
sp_v1.1_unigene20489
|
SustainPine v1.1
|
352
|
|
• AutoFact: Polynucleotidyl transferase, Ribonuclease H fold (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q4N7_MEDTR
|
1.0e-22
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.03925e-22
|
|
Internal
|
|
sp_v1.1_unigene20795
|
SustainPine v1.1
|
317
|
|
• AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH
|
2.0e-16
|
|
• FL-Next: tr=F5K24.1 protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
3.76573e-16
|
|
Internal
|
|
sp_v1.1_unigene21385
|
SustainPine v1.1
|
219
|
|
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS
|
1.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
2.53525e-12
|
|
Internal
|
|
sp_v1.1_unigene25108
|
SustainPine v1.1
|
1323
|
|
• AutoFact: rve domain containing protein
|
2.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative N-terminus
|
|
sp_v1.1_unigene25228
|
SustainPine v1.1
|
1119
|
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative N-terminus
|
|
sp_v1.1_unigene25293
|
SustainPine v1.1
|
1486
|
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative Complete
|
|
sp_v1.1_unigene26496
|
SustainPine v1.1
|
1903
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QVH8_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative Complete
|
|
sp_v1.1_unigene27115
|
SustainPine v1.1
|
267
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10I89_ORYSJ
|
1.0e-15
|
|
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
2.18368e-16
|
|
Internal
|
