Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pseudouridine synthase, catalytic domain

Term: IPR020103  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1247 SustainPine v1.1 1094
AutoFact: Ribosomal pseudouridine synthase, putative n=1 Tax=Ricinus communis RepID=B9RFI4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pseudouridine synthase family protein 0.0
C-terminus
sp_v1.1_unigene3476 SustainPine v1.1 1530
AutoFact: SVR1; SVR1 (SUPPRESSOR OF VARIEGATION 1); RNA binding / pseudouridine synthase 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene4378 SustainPine v1.1 503
AutoFact: Pseudouridylate synthase, putative n=1 Tax=Ricinus communis RepID=B9R8H6_RICCO 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase family protein 0.0
C-terminus
sp_v1.1_unigene7149 SustainPine v1.1 1346
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase family protein 0.0
Putative Complete
sp_v1.1_unigene7470 SustainPine v1.1 2794
AutoFact: tRNA pseudouridine synthase d, putative n=1 Tax=Ricinus communis RepID=B9RER1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase 0.0
Complete
sp_v1.1_unigene12016 SustainPine v1.1 828
AutoFact: ribosomal pseudouridine synthase, putative (EC:3.2.1.17); K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] 1.0e-35
FL-Next: sp=RNA pseudourine synthase 2, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribosomal large subunit pseudouridine synthase-like 0.0
Putative C-terminus
sp_v1.1_unigene12413 SustainPine v1.1 923
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pseudouridylate synthase 0.0
N-terminus
sp_v1.1_unigene13013 SustainPine v1.1 805
AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9S012_RICCO 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase family protein 0.0
Internal
sp_v1.1_unigene13288 SustainPine v1.1 685
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=A9P2G1_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase family protein 0.0
N-terminus
sp_v1.1_unigene27063 SustainPine v1.1 1760
AutoFact: centromere/microtubule binding protein cbf5, putative; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene28232 SustainPine v1.1 1313
AutoFact: pseudouridine synthase family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pseudouridine synthase family protein 0.0
C-terminus
sp_v1.1_unigene29148 SustainPine v1.1 1188
AutoFact: ribosomal pseudouridine synthase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal pseudouridine 0.0
C-terminus
sp_v1.1_unigene32048 SustainPine v1.1 313
AutoFact: pseudouridylate synthase/ transporter 8.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: trna pseudouridine synthase b 6.42449e-21
C-terminus
sp_v1.1_unigene38141 SustainPine v1.1 403
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase family protein 0.0
Internal
sp_v1.1_unigene38932 SustainPine v1.1 684
AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9SM90_RICCO 0.0
FL-Next: sp=Pseudouridine synthase; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene40664 SustainPine v1.1 330
AutoFact: ribosomal pseudouridine synthase, putative 2.0e-23
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribosomal pseudouridine 1.15098e-25
Internal
sp_v1.1_unigene40937 SustainPine v1.1 489
AutoFact: pseudouridine synthase family protein 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pseudouridine synthase family protein 1.84178e-39
Internal
sp_v1.1_unigene46089 SustainPine v1.1 487
AutoFact: ribosomal pseudouridine synthase, putative (EC:3.2.1.17) 3.0e-30
FL-Next: sp=RNA pseudourine synthase 4, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosomal pseudouridine 5.76489e-33
Internal
sp_v1.1_unigene62215 SustainPine v1.1 464
AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJM4_VITVI 2.0e-28
FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna pseudouridine synthase family protein 5.3005e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain