Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene26179 SustainPine v1.1 1342
• AutoFact: AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding; K07976 Rab family, other 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein 0.0
Complete
sp_v1.1_unigene26404 SustainPine v1.1 1672
• AutoFact: ADP-ribosylation factor, putative; K07952 ADP-ribosylation factor related protein 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arf-like gtpase 0.0
Complete
sp_v1.1_unigene26407 SustainPine v1.1 1200
• AutoFact: RabF2A2; Rab5/RabF-family small GTPase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp binding protein 0.0
Complete
sp_v1.1_unigene26452 SustainPine v1.1 777
• AutoFact: GTP-binding protein n=11 Tax=rosids RepID=Q9LFT9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab6 -family small gtpase 0.0
N-terminus
sp_v1.1_unigene27637 SustainPine v1.1 1474
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab7 -family small gtpase 0.0
Complete
sp_v1.1_unigene28379 SustainPine v1.1 860
• AutoFact: Rab8/RabE-family small GTPase n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SI73_PHYPA 0.0
• FL-Next: tr=Ras-related protein ARA-3, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: gtp-binding protein ara-3 0.0
Complete
sp_v1.1_unigene28685 SustainPine v1.1 740
• AutoFact: Rac-like GTP-binding protein 7 n=4 Tax=Spermatophyta RepID=RAC7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rop-family small gtpase 0.0
Putative N-terminus
sp_v1.1_unigene29141 SustainPine v1.1 526
• AutoFact: ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding; K07976 Rab family, other 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene30006 SustainPine v1.1 1131
• AutoFact: RabF2A2; Rab5/RabF-family small GTPase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp binding protein 0.0
Complete
sp_v1.1_unigene31313 SustainPine v1.1 1384
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab7 -family small gtpase 0.0
Complete
sp_v1.1_unigene35661 SustainPine v1.1 501
• AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9S2N7_RICCO 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 7.32753e-33
N-terminus
sp_v1.1_unigene37161 SustainPine v1.1 1088
• AutoFact: GTP-binding protein yptv3, putative n=1 Tax=Ricinus communis RepID=B9T5U9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: member of ras oncogene family-like 3 0.0
Complete
sp_v1.1_unigene46013 SustainPine v1.1 368
• AutoFact: RabF1; Rab5/RabF-family small GTPase; K07888 Ras-related protein Rab-5B 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp binding protein 6.04621e-19
Internal
sp_v1.1_unigene47861 SustainPine v1.1 285
• AutoFact: Rab7 n=1 Tax=Pennisetum glaucum RepID=Q5MGQ9_PENAM 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab7 6.00152e-38
Putative N-terminus
sp_v1.1_unigene51245 SustainPine v1.1 761
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
N-terminus
sp_v1.1_unigene54614 SustainPine v1.1 325
• AutoFact: GTP-binding protein n=11 Tax=rosids RepID=Q9LFT9_ARATH 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab-like protein 1.23614e-35
Internal
sp_v1.1_unigene56566 SustainPine v1.1 836
• AutoFact: Rac-like GTP-binding protein 7 n=4 Tax=Spermatophyta RepID=RAC7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rop-family small gtpase 0.0
Complete
sp_v1.1_unigene58696 SustainPine v1.1 1297
• AutoFact: RanA1; ran-family small GTPase; K07936 GTP-binding nuclear protein Ran 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small ras-like gtp-binding protein 0.0
Complete
sp_v1.1_unigene58766 SustainPine v1.1 1200
• AutoFact: similar to ADP-ribosylation factor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 0.0
Complete
sp_v1.1_unigene59006 SustainPine v1.1 698
• AutoFact: Rac-like GTP-binding protein 4 n=8 Tax=commelinids RepID=RAC4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small gtp-binding protein ac3 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain