Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene39665 SustainPine v1.1 631
AutoFact: DEAD-box ATP-dependent RNA helicase 1 n=3 Tax=Arabidopsis RepID=RH1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box-like rna helicase 0.0
N-terminus
sp_v1.1_unigene39756 SustainPine v1.1 532
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene40224 SustainPine v1.1 309
AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Blast2go: u5 small nuclear ribonucleoprotein helicase 1.4013e-45
Internal
sp_v1.1_unigene45179 SustainPine v1.1 330
AutoFact: DEAD/DEAH box helicase, putative; K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene50157 SustainPine v1.1 340
AutoFact: Helicase domain-containing protein n=4 Tax=Arabidopsis RepID=D7KD38_ARALY 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene51299 SustainPine v1.1 2050
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene56153 SustainPine v1.1 232
AutoFact: dead box ATP-dependent RNA helicase, putative 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna helicase dbp4 6.57897e-29
Internal
sp_v1.1_unigene58186 SustainPine v1.1 1041
AutoFact: DEAD-box protein abstrakt, putative; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
N-terminus
sp_v1.1_unigene58490 SustainPine v1.1 385
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene60388 SustainPine v1.1 1220
AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene62347 SustainPine v1.1 604
AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Internal
sp_v1.1_unigene62349 SustainPine v1.1 433
AutoFact: ATP-dependent DNA helicase, putative; K10730 ATP-dependent DNA helicase Q4 [EC:3.6.1.-] 4.00001e-40
FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rothmund-thomson syndrome dna helicase 1.4013e-44
Internal
sp_v1.1_unigene64572 SustainPine v1.1 640
AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene69801 SustainPine v1.1 501
AutoFact: Eukaryotic initiation factor 4A-13 (Fragment) n=5 Tax=core eudicotyledons RepID=IF413_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
N-terminus
sp_v1.1_unigene78741 SustainPine v1.1 370
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.19887e-40
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain