Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene23770 SustainPine v1.1 2058
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene26502 SustainPine v1.1 2163
• AutoFact: gpm624; LOC100273717; K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene27466 SustainPine v1.1 566
• AutoFact: DEAD/DEAH box helicase, putative n=2 Tax=Arabidopsis thaliana RepID=UPI0001A7B2D1 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 56 3.40714e-31
Internal
sp_v1.1_unigene27936 SustainPine v1.1 1152
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_PHAAU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene28535 SustainPine v1.1 1934
• AutoFact: ATP-dependent RNA helicase dhh1; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29794 SustainPine v1.1 1703
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene30047 SustainPine v1.1 1285
• AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead deah box helicase 0.0
Internal
sp_v1.1_unigene30624 SustainPine v1.1 401
• AutoFact: Putative DEAD-box ATP-dependent RNA helicase 29 n=2 Tax=Arabidopsis RepID=RH29_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.11101e-31
Internal
sp_v1.1_unigene31183 SustainPine v1.1 492
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SS37_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v1.1_unigene31298 SustainPine v1.1 722
• AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983869 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene31328 SustainPine v1.1 502
• AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 2.0e-35
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase 6.40436e-37
Internal
sp_v1.1_unigene32294 SustainPine v1.1 631
• AutoFact: ATP-dependent rRNA helicase spb4 n=2 Tax=Andropogoneae RepID=B6SPG8_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box 0.0
Internal
sp_v1.1_unigene36143 SustainPine v1.1 1414
• AutoFact: RECQI1; RECQI1 (Arabidopsis RecQ helicase l1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding 0.0
• FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 0.0
C-terminus
sp_v1.1_unigene36844 SustainPine v1.1 453
• AutoFact: dead box ATP-dependent RNA helicase, putative 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene37192 SustainPine v1.1 777
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Arabidopsis RepID=RH37_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene37222 SustainPine v1.1 438
• AutoFact: dead box ATP-dependent RNA helicase, putative 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: atp-dependent rna helicase 1.75418e-26
Internal
sp_v1.1_unigene38530 SustainPine v1.1 552
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SLR6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Internal
sp_v1.1_unigene38531 SustainPine v1.1 421
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene38773 SustainPine v1.1 397
• AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 1.0e-38
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase 2.67839e-38
Internal
sp_v1.1_unigene39358 SustainPine v1.1 375
• AutoFact: DEAD/DEAH helicase family protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box helicase family protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain