Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, PHD-finger

Term: IPR019787  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene827 SustainPine v1.1 1439
AutoFact: ELM2 domain-containing protein / PHD finger family protein 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene1023 SustainPine v1.1 1327
AutoFact: PHD finger protein-like n=2 Tax=Oryza sativa RepID=Q5N7H9_ORYSJ 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.76417e-22
Putative Complete
sp_v1.1_unigene1126 SustainPine v1.1 857
AutoFact: zinc finger protein, putative 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene2215 SustainPine v1.1 1497
AutoFact: ELM2 domain-containing protein / PHD finger family protein 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene4336 SustainPine v1.1 424
AutoFact: putative collagen [Oryza sativa Japonica Group] gb|ABF98555.1| PHD-finger family protein, expressed [Oryza sativa (japonica cultivar-group)] gb|EAY91653.1| hypothetical protein OsI_13292 [Oryza sativa Indica Group] 7.0e-27
FL-Next: sp=PHD finger protein At2g01810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.59748e-43
Putative C-terminus
sp_v1.1_unigene4896 SustainPine v1.1 1671
AutoFact: phd finger transcription factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
Complete
sp_v1.1_unigene5729 SustainPine v1.1 1428
AutoFact: PHD multi-domain protein 8.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene12733 SustainPine v1.1 811
AutoFact: protein binding / zinc ion binding 0.0
FL-Next: sp=PHD finger protein At1g33420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger family protein 0.0
Putative C-terminus
sp_v1.1_unigene14213 SustainPine v1.1 1593
AutoFact: DNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v1.1_unigene15923 SustainPine v1.1 1791
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRM7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah-phd domain-containing protein 0.0
Complete
sp_v1.1_unigene16111 SustainPine v1.1 1677
AutoFact: DNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v1.1_unigene17249 SustainPine v1.1 1284
AutoFact: DNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v1.1_unigene17575 SustainPine v1.1 924
AutoFact: SDG933; SET domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
N-terminus
sp_v1.1_unigene17927 SustainPine v1.1 452
AutoFact: sumo ligase, putative 9.0e-36
FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Blast2go: protein 1.221e-35
Internal
sp_v1.1_unigene25969 SustainPine v1.1 1169
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TSM0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
Complete
sp_v1.1_unigene27289 SustainPine v1.1 433
AutoFact: ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B02D 1.0e-27
FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 super family 2.08996e-27
Internal
sp_v1.1_unigene27667 SustainPine v1.1 613
AutoFact: ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1); protein binding / transcription factor/ zinc ion binding 5.04467e-44
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene27787 SustainPine v1.1 671
AutoFact: PHD finger family protein 5.0e-33
FL-Next: sp=PHD finger protein At3g20280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger family protein 1.42066e-36
Putative N-terminus
sp_v1.1_unigene27852 SustainPine v1.1 684
AutoFact: PHD finger family protein [Arabidopsis thaliana] gb|AAF26130.1|AC011620_6 unknown protein [Arabidopsis thaliana] gb|AAM53309.1| unknown protein [Arabidopsis thaliana] gb|AAO00928.1| unknown protein [Arabidopsis thaliana] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: splicing arginine serine-rich interacting 0.0
Internal
sp_v1.1_unigene29173 SustainPine v1.1 654
AutoFact: HAT 3.1 [Arabidopsis thaliana] 5.60519e-45
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 8.40779e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain