Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Zinc finger, PHD-type, conserved site

Term: IPR019786  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene32920 SustainPine v1.1 604
AutoFact: 2x PHD domain containing protein 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v1.1_unigene37313 SustainPine v1.1 649
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein SELMODRAFT_406466 [Selaginella moellendorffii] 3.90035e-12
N-terminus
sp_v1.1_unigene38081 SustainPine v1.1 790
AutoFact: chromodomain helicase DNA binding protein, putative (EC:2.7.11.1) 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 5.87291e-28
Putative N-terminus
sp_v1.1_unigene40317 SustainPine v1.1 506
AutoFact: PHD domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 1.33517e-21
Putative N-terminus
sp_v1.1_unigene43487 SustainPine v1.1 557
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: phd finger family protein 1.25662e-30
Internal
sp_v1.1_unigene59595 SustainPine v1.1 1467
AutoFact: DNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v1.1_unigene59752 SustainPine v1.1 1009
AutoFact: DNA binding protein, putative 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v1.1_unigene59992 SustainPine v1.1 1127
AutoFact: DNA binding protein, putative 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 6.88038e-43
Putative Complete
sp_v1.1_unigene72471 SustainPine v1.1 264
AutoFact: PRHA; PRHA (PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A); protein binding / sequence-specific DNA binding / transcription activator/ transcription factor 3.0e-30
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.98538e-33
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain