Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene28868 SustainPine v1.1 1959
AutoFact: transcription factor, putative 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29907 SustainPine v1.1 655
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.15757e-35
C-terminus
sp_v1.1_unigene31595 SustainPine v1.1 401
AutoFact: phaseolin G-box binding protein PG2 [Phaseolus vulgaris] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myc2 0.0
Internal
sp_v1.1_unigene35503 SustainPine v1.1 755
AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
Blast2go: dna binding 0.0
Putative C-terminus
sp_v1.1_unigene35922 SustainPine v1.1 620
AutoFact: transcription factor, putative 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor-like protein 4.86743e-30
C-terminus
sp_v1.1_unigene36856 SustainPine v1.1 966
AutoFact: HLH domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene36984 SustainPine v1.1 502
AutoFact: Basic helix-loop-helix protein (Fragment) n=1 Tax=Fragaria x ananassa RepID=Q5ULY0_FRAAN 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene38962 SustainPine v1.1 461
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWI9_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.65387e-32
Internal
sp_v1.1_unigene39991 SustainPine v1.1 382
AutoFact: basic helix-loop-helix (bHLH) family protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 2.03875e-14
N-terminus
sp_v1.1_unigene45468 SustainPine v1.1 655
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBD1_RICCO 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene54785 SustainPine v1.1 458
AutoFact: basic helix-loop-helix (bHLH) family protein 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic helix-loop-helix family protein 3.11036e-31
N-terminus
sp_v1.1_unigene54851 SustainPine v1.1 402
AutoFact: RGE1; RGE1 (RETARDED GROWTH OF EMBRYO 1); DNA binding / transcription factor 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic helix-loop-helix family protein 0.0
Internal
sp_v1.1_unigene58486 SustainPine v1.1 617
AutoFact: bHLH093 (beta HLH protein 93); DNA binding / transcription factor 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene60799 SustainPine v1.1 493
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myc2 2.52234e-44
Internal
sp_v1.1_unigene66671 SustainPine v1.1 394
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myc2 4.17724e-39
Internal
sp_v1.1_unigene68182 SustainPine v1.1 457
AutoFact: HLH domain containing protein 0.0001
Coding
sp_v1.1_unigene70823 SustainPine v1.1 272
AutoFact: HLH domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 4.72513e-11
Internal
sp_v1.1_unigene71613 SustainPine v1.1 246
AutoFact: DNA binding protein, putative 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene78053 SustainPine v1.1 412
AutoFact: HLH domain containing protein 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.44961e-36
N-terminus
sp_v1.1_unigene80120 SustainPine v1.1 454
AutoFact: HLH domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain