Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Helix-loop-helix DNA-binding domain

Term: IPR001092  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene45468 SustainPine v1.1 655
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBD1_RICCO 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene54785 SustainPine v1.1 458
AutoFact: basic helix-loop-helix (bHLH) family protein 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic helix-loop-helix family protein 3.11036e-31
N-terminus
sp_v1.1_unigene54851 SustainPine v1.1 402
AutoFact: RGE1; RGE1 (RETARDED GROWTH OF EMBRYO 1); DNA binding / transcription factor 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic helix-loop-helix family protein 0.0
Internal
sp_v1.1_unigene58486 SustainPine v1.1 617
AutoFact: bHLH093 (beta HLH protein 93); DNA binding / transcription factor 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene59885 SustainPine v1.1 502
AutoFact: Unknown EST 2.0e-08
Coding
sp_v1.1_unigene60799 SustainPine v1.1 493
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myc2 2.52234e-44
Internal
sp_v1.1_unigene66671 SustainPine v1.1 394
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myc2 4.17724e-39
Internal
sp_v1.1_unigene70823 SustainPine v1.1 272
AutoFact: HLH domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 4.72513e-11
Internal
sp_v1.1_unigene71613 SustainPine v1.1 246
AutoFact: DNA binding protein, putative 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene78053 SustainPine v1.1 412
AutoFact: HLH domain containing protein 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.44961e-36
N-terminus
sp_v1.1_unigene80120 SustainPine v1.1 454
AutoFact: HLH domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Putative N-terminus
sp_v1.1_unigene84112 SustainPine v1.1 1207
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJS4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain