Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helix-loop-helix DNA-binding domain

Term: IPR001092  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene13096 SustainPine v1.1 1451
AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
Blast2go: helix-loop-helix protein 1 a 0.0
C-terminus
sp_v1.1_unigene14198 SustainPine v1.1 600
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.7782e-13
Putative C-terminus
sp_v1.1_unigene16151 SustainPine v1.1 775
AutoFact: Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=Q2HTT3_MEDTR 8.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Complete
sp_v1.1_unigene17442 SustainPine v1.1 1114
AutoFact: basic helix-loop-helix (bHLH) family protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.01018e-14
Putative Complete
sp_v1.1_unigene17961 SustainPine v1.1 1096
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v1.1_unigene18197 SustainPine v1.1 410
AutoFact: Putative basic helix-loop-helix protein BHLH21 n=1 Tax=Lotus japonicus RepID=C0JP28_LOTJA 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fe-deficiency induced transcription factor 1 2.72336e-19
Internal
sp_v1.1_unigene18671 SustainPine v1.1 922
AutoFact: HLH domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Complete
sp_v1.1_unigene18909 SustainPine v1.1 770
AutoFact: KDR; KDR (KIDARI); transcription regulator 1.0e-23
FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-binding protein 2.39904e-23
Complete
sp_v1.1_unigene18949 SustainPine v1.1 1516
AutoFact: AMS; AMS (ABORTED MICROSPORES); DNA binding / transcription factor 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene26704 SustainPine v1.1 1540
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJS4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene27524 SustainPine v1.1 734
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEI3_RICCO 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 1.33597e-20
Internal
sp_v1.1_unigene27618 SustainPine v1.1 977
AutoFact: BHLH038; DNA binding / transcription factor 3.0e-07
FL-Next: sp=Transcription factor bHLH101; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v1.1_unigene28107 SustainPine v1.1 1844
AutoFact: Transcription factor AtMYC2, putative (EC:1.3.1.74); K13422 transcription factor MYC2 9.00054e-42
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Blast2go: transcription factor 0.0
C-terminus
sp_v1.1_unigene28868 SustainPine v1.1 1959
AutoFact: transcription factor, putative 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene31595 SustainPine v1.1 401
AutoFact: phaseolin G-box binding protein PG2 [Phaseolus vulgaris] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myc2 0.0
Internal
sp_v1.1_unigene35503 SustainPine v1.1 755
AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
Blast2go: dna binding 0.0
Putative C-terminus
sp_v1.1_unigene36856 SustainPine v1.1 966
AutoFact: HLH domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene36984 SustainPine v1.1 502
AutoFact: Basic helix-loop-helix protein (Fragment) n=1 Tax=Fragaria x ananassa RepID=Q5ULY0_FRAAN 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene38962 SustainPine v1.1 461
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWI9_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.65387e-32
Internal
sp_v1.1_unigene39991 SustainPine v1.1 382
AutoFact: basic helix-loop-helix (bHLH) family protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 2.03875e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain