Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, RING-CH-type

Term: IPR011016  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene506 SustainPine v1.1 1531
• AutoFact: protein binding protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene1055 SustainPine v1.1 1940
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Putative Complete
sp_v1.1_unigene2282 SustainPine v1.1 2184
• AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_851231.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene3956 SustainPine v1.1 685
• AutoFact: membrane associated ring finger 1,8, putative 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane associated ring finger 0.0
N-terminus
sp_v1.1_unigene5294 SustainPine v1.1 1610
• AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI000198426A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 0.0
Complete
sp_v1.1_unigene10123 SustainPine v1.1 1214
• AutoFact: binding / protein binding / zinc ion binding 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene17239 SustainPine v1.1 1680
• AutoFact: membrane associated ring finger 1,8, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 0.0
Complete
sp_v1.1_unigene17414 SustainPine v1.1 789
• AutoFact: Zinc finger family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LM92_ARALY 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 3.00617e-16
C-terminus
sp_v1.1_unigene23660 SustainPine v1.1 1062
• AutoFact: RING-H2 finger protein ATL3J, putative 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 7.19225e-15
Complete
sp_v1.1_unigene24874 SustainPine v1.1 668
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 3.7918e-40
C-terminus
sp_v1.1_unigene25860 SustainPine v1.1 1123
• AutoFact: membrane associated ring finger 1,8, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane associated ring finger 0.0
C-terminus
sp_v1.1_unigene27826 SustainPine v1.1 1108
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 0.0
Complete
sp_v1.1_unigene31431 SustainPine v1.1 519
• AutoFact: RING-H2 finger protein ATL3J, putative 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v1.1_unigene36915 SustainPine v1.1 318
• AutoFact: protein binding / zinc ion binding; K10661 E3 ubiquitin-protein ligase MARCH6 [EC:6.3.2.19] 7.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.22303e-26
Internal
sp_v1.1_unigene37588 SustainPine v1.1 1183
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 4.16968e-40
Complete
sp_v1.1_unigene42000 SustainPine v1.1 446
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v1.1_unigene69681 SustainPine v1.1 391
• AutoFact: membrane associated ring finger 1,8, putative 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 2.8026e-45
Putative N-terminus
sp_v1.1_unigene70731 SustainPine v1.1 385
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9STH4_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 2.93752e-29
Putative C-terminus
sp_v1.1_unigene80854 SustainPine v1.1 783
• AutoFact: zinc finger protein, putative 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.13734e-23
Complete
sp_v1.1_unigene80974 SustainPine v1.1 424
• AutoFact: BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at1g63840 1.48267e-20
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain