Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene789 SustainPine v1.1 1217
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 0.0
Putative C-terminus
sp_v1.1_unigene823 SustainPine v1.1 1532
• AutoFact: CHR932; chromatin remodeling complex subunit 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
N-terminus
sp_v1.1_unigene843 SustainPine v1.1 1340
• AutoFact: DEAD/DEAH box helicase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene955 SustainPine v1.1 2418
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene989 SustainPine v1.1 1146
• AutoFact: ETL1; ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf2 family dna-dependent atpase 0.0
Putative N-terminus
sp_v1.1_unigene1360 SustainPine v1.1 2904
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SX92_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene1586 SustainPine v1.1 1973
• AutoFact: ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 13 0.0
Complete
sp_v1.1_unigene1677 SustainPine v1.1 1528
• AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v1.1_unigene1985 SustainPine v1.1 1995
• AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SPB9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: superkiller viralicidic activity 2-like 2 0.0
N-terminus
sp_v1.1_unigene2043 SustainPine v1.1 2540
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene2208 SustainPine v1.1 3484
• AutoFact: DEAD box RNA helicase (RH26) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Putative Complete
sp_v1.1_unigene2369 SustainPine v1.1 1082
• AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX15_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent rna 0.0
Putative N-terminus
sp_v1.1_unigene2667 SustainPine v1.1 2697
• AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene3436 SustainPine v1.1 1200
• AutoFact: DEAD-box protein abstrakt, putative; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
C-terminus
sp_v1.1_unigene3755 SustainPine v1.1 1852
• AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna repair helicase 0.0
Putative Complete
sp_v1.1_unigene3873 SustainPine v1.1 3647
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene4106 SustainPine v1.1 1774
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R9L5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Putative C-terminus
sp_v1.1_unigene4601 SustainPine v1.1 1329
• AutoFact: helicase, putative; K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hua enhancer 2 0.0
Internal
sp_v1.1_unigene4679 SustainPine v1.1 959
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S7A6_RICCO 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf2 family dna-dependent atpase 4.03442e-35
Putative C-terminus
sp_v1.1_unigene4744 SustainPine v1.1 571
• AutoFact: ATP-dependent RNA helicase, putative; K13117 ATP-dependent RNA helicase DDX35 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent rna 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain