Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene28027 SustainPine v1.1 1692
AutoFact: ubiquitin ligase protein COP1; K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene28154 SustainPine v1.1 1966
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene28375 SustainPine v1.1 614
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9R702_RICCO 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: cockayne syndrome 1 homolog 0.0
C-terminus
sp_v1.1_unigene28841 SustainPine v1.1 492
AutoFact: Unknown EST 0.0
unknown
sp_v1.1_unigene28981 SustainPine v1.1 1408
AutoFact: WD-repeat protein 4 n=3 Tax=Andropogoneae RepID=B6TK73_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene29053 SustainPine v1.1 1374
AutoFact: [R] COG2319 FOG: WD40 repeat 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 0.0
C-terminus
sp_v1.1_unigene29069 SustainPine v1.1 1904
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene29523 SustainPine v1.1 2151
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene30617 SustainPine v1.1 451
AutoFact: NACHT and WD repeat domain-containing protein 1-like 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family 0.0
Internal
sp_v1.1_unigene30782 SustainPine v1.1 398
AutoFact: WD-repeat protein, putative; K03364 cell division cycle 20-like protein 1, cofactor of APC complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene31238 SustainPine v1.1 422
AutoFact: CDC20.1; signal transducer; K03363 cell division cycle 20, cofactor of APC complex 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 2.33766e-34
Internal
sp_v1.1_unigene32327 SustainPine v1.1 799
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
N-terminus
sp_v1.1_unigene34190 SustainPine v1.1 591
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wdr13 protein 0.0
Putative N-terminus
sp_v1.1_unigene35131 SustainPine v1.1 631
AutoFact: WD-40 repeat family protein 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 2.58112e-26
N-terminus
sp_v1.1_unigene35612 SustainPine v1.1 1128
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene36406 SustainPine v1.1 1116
AutoFact: nfc103; MSI type nucleosome/chromatin assembly factor C; K10752 histone-binding protein RBBP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
sp_v1.1_unigene53709 SustainPine v1.1 427
AutoFact: Transducin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LZI0_ARALY 3.0e-20
FL-Next: tr=Putative uncharacterized protein AT4g11270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 3.85455e-21
Internal
sp_v1.1_unigene53797 SustainPine v1.1 179
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.38238e-15
Internal
sp_v1.1_unigene57779 SustainPine v1.1 325
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v1.1_unigene58332 SustainPine v1.1 437
AutoFact: transducin family protein / WD-40 repeat family protein; K11790 denticleless 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 2.90043e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain