Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene4765 SustainPine v1.1 2012
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene6575 SustainPine v1.1 1693
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene6613 SustainPine v1.1 1426
AutoFact: [R] COG2319 FOG: WD40 repeat 9.0e-07
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene6666 SustainPine v1.1 1210
AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene7039 SustainPine v1.1 2023
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7616 SustainPine v1.1 1452
AutoFact: transducin family protein / WD-40 repeat family protein; K13124 mitogen-activated protein kinase organizer 1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene7732 SustainPine v1.1 1375
AutoFact: WD-repeat protein, putative; K03364 cell division cycle 20-like protein 1, cofactor of APC complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene8237 SustainPine v1.1 981
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 0.0
FL-Next: sp=Guanine nucleotide-binding protein subunit beta-like protein B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene8357 SustainPine v1.1 908
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene8438 SustainPine v1.1 1467
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9REV1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene9358 SustainPine v1.1 1387
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Complete
sp_v1.1_unigene10138 SustainPine v1.1 2128
AutoFact: WD-40 repeat-containing protein MSI1 n=13 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Complete
sp_v1.1_unigene10242 SustainPine v1.1 775
AutoFact: similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene10297 SustainPine v1.1 748
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pak1 interacting protein 1 1.31443e-38
Putative C-terminus
sp_v1.1_unigene10983 SustainPine v1.1 469
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTB5_RICCO 5.0e-18
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleotide binding 8.81668e-18
N-terminus
sp_v1.1_unigene11002 SustainPine v1.1 739
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set1 complex component swd2 0.0
C-terminus
sp_v1.1_unigene11287 SustainPine v1.1 820
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Putative C-terminus
sp_v1.1_unigene11943 SustainPine v1.1 786
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding 0.0
Complete
sp_v1.1_unigene12637 SustainPine v1.1 1708
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat 0.0
Putative Complete
sp_v1.1_unigene14399 SustainPine v1.1 1198
AutoFact: WDR2; WD repeat 2; K11805 WD repeat-containing protein 68 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain