Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene27830 SustainPine v1.1 361
• AutoFact: RNA polymerase sigma factor rpoD, putative 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 4.67148e-11
C-terminus
sp_v1.1_unigene28311 SustainPine v1.1 721
• AutoFact: Heat shock factor protein, putative 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.40694e-19
Internal
sp_v1.1_unigene28346 SustainPine v1.1 1595
• AutoFact: lupus la ribonucleoprotein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lupus la 0.0
N-terminus
sp_v1.1_unigene29603 SustainPine v1.1 1415
• AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
• FL-Next: tr=Caffeic acid ortho-methyltransferase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: alkaloid o-methyltransferase related 0.0
Complete
sp_v1.1_unigene30698 SustainPine v1.1 593
• AutoFact: CHB904; chromatin remodeling complex subunit; K11649 SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: swirm domain containing expressed 4.13761e-40
Internal
sp_v1.1_unigene31799 SustainPine v1.1 389
• AutoFact: DEL1; DEL1 (DP-E2F-LIKE 1); DNA binding / transcription factor 2.0e-12
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: protein 1.06917e-15
Internal
sp_v1.1_unigene32053 SustainPine v1.1 695
• AutoFact: DEL1; repressor, antagonist of e2f-dp complex 8.0e-34
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: antagonist of e2f-dp complex 2.22806e-43
Putative N-terminus
sp_v1.1_unigene37506 SustainPine v1.1 987
• AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alkaloid o-methyltransferase related 0.0
Internal
sp_v1.1_unigene37733 SustainPine v1.1 860
• AutoFact: HSFB4; AT-HSFB4; DNA binding / transcription factor 2.0e-40
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene38595 SustainPine v1.1 721
• AutoFact: SPO11-2 (SPORULATION 11-2); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ catalytic (EC:5.99.1.3) 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: spo11 protein 0.0
N-terminus
sp_v1.1_unigene39822 SustainPine v1.1 651
• AutoFact: polr3c, MGC82132; polymerase (RNA) III (DNA directed) polypeptide C (62kD); K03023 DNA-directed RNA polymerase III subunit C3 [EC:2.7.7.6] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: polymerase iii (dna directed) polypeptide c 4.64437e-37
C-terminus
sp_v1.1_unigene40315 SustainPine v1.1 814
• AutoFact: Heat shock factor protein HSF8, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock transcription factor 1 0.0
Internal
sp_v1.1_unigene40508 SustainPine v1.1 373
• AutoFact: FLD; FLD (FLOWERING LOCUS D); amine oxidase/ electron carrier/ oxidoreductase; K11450 lysine-specific histone demethylase 1 [EC:1.-.-.-] 1.0e-26
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: swirm domain protein 7.06644e-31
Internal
sp_v1.1_unigene54371 SustainPine v1.1 242
• AutoFact: Heat shock transcription factor (HSF) n=2 Tax=Glycine max RepID=Q00M68_SOYBN 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock transcription factor 2.14865e-17
Internal
sp_v1.1_unigene55419 SustainPine v1.1 355
• AutoFact: dimerization domain containing protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v1.1_unigene56080 SustainPine v1.1 904
• AutoFact: Transcription initiation factor IIF subunit beta, putative n=1 Tax=Ricinus communis RepID=B9R825_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iif subunit 0.0
C-terminus
sp_v1.1_unigene59301 SustainPine v1.1 521
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 7.0e-29
• FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
• Blast2go: histone h1-like protein 1.23466e-28
Internal
sp_v1.1_unigene59346 SustainPine v1.1 1259
• AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene59396 SustainPine v1.1 587
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
• FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
• Blast2go: histone h1 1.66516e-26
N-terminus
sp_v1.1_unigene59459 SustainPine v1.1 1268
• AutoFact: CUL1; cullin 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atcul1 (arabidopsis thaliana cullin 1) protein binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain