Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene9610 SustainPine v1.1 2378
AutoFact: Cullin, putative n=1 Tax=Ricinus communis RepID=B9S8U7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene10591 SustainPine v1.1 821
AutoFact: RNA polymerase sigma factor rpoD, putative 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.05097e-43
C-terminus
sp_v1.1_unigene10594 SustainPine v1.1 883
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RAB3_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
N-terminus
sp_v1.1_unigene10920 SustainPine v1.1 3342
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
Putative Complete
sp_v1.1_unigene11523 SustainPine v1.1 783
AutoFact: Anaphase-promoting complex subunit 2 n=2 Tax=Arabidopsis RepID=APC2_ARATH 2.0e-10
FL-Next: sp=Anaphase-promoting complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v1.1_unigene13394 SustainPine v1.1 529
AutoFact: E2Fa2-2; transcription factor E2F 0.0
FL-Next: sp=Transcription factor E2FB; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor e2f 0.0
Internal
sp_v1.1_unigene13618 SustainPine v1.1 1591
AutoFact: SMH903; single myb histone 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 0.0
Complete
sp_v1.1_unigene14101 SustainPine v1.1 1306
AutoFact: DPa; transcription factor DP, E2 dimerization partner protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
C-terminus
sp_v1.1_unigene14924 SustainPine v1.1 1557
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 9.70796e-28
Complete
sp_v1.1_unigene15057 SustainPine v1.1 3444
AutoFact: CUL1; cullin 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15251 SustainPine v1.1 1294
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-35
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1-like protein 2.19357e-35
Complete
sp_v1.1_unigene15342 SustainPine v1.1 1229
AutoFact: Histone-like protein (Fragment) n=12 Tax=Fritillaria liliacea RepID=Q93WC3_FRILI 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 1.11977e-33
Complete
sp_v1.1_unigene15712 SustainPine v1.1 1555
AutoFact: ATS9; ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9); K03036 26S proteasome regulatory subunit N6 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15969 SustainPine v1.1 1359
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
sp_v1.1_unigene16025 SustainPine v1.1 1396
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a2 0.0
Complete
sp_v1.1_unigene16166 SustainPine v1.1 3652
AutoFact: putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16513 SustainPine v1.1 1111
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 3.92364e-43
Complete
sp_v1.1_unigene16574 SustainPine v1.1 1111
AutoFact: O-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9S0A7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeic acid o-methyltransferase 0.0
N-terminus
sp_v1.1_unigene16883 SustainPine v1.1 1518
AutoFact: ATS9; ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9); K03036 26S proteasome regulatory subunit N6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene17416 SustainPine v1.1 3461
AutoFact: CUL4; cullin 4; K10609 cullin 4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein cullin 4 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain