Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: YTH domain

Term: IPR007275  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene667 SustainPine v1.1 1851
AutoFact: CPSF30; CPSF30; RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c-x8-c-x5-c-x3-h type zn-finger 0.0
Putative N-terminus
sp_v1.1_unigene816 SustainPine v1.1 3154
AutoFact: yth domain-containing protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 0.0
Complete
sp_v1.1_unigene3502 SustainPine v1.1 1772
AutoFact: Yth domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RZX3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 0.0
Complete
sp_v1.1_unigene4969 SustainPine v1.1 573
AutoFact: YTH domain containing protein 7.0e-19
FL-Next: sp=Cleavage and polyadenylation specificity factor CPSF30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene10916 SustainPine v1.1 775
AutoFact: yth domain-containing protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 0.0
Internal
sp_v1.1_unigene13070 SustainPine v1.1 1973
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubisco subunit binding-protein beta subunit-like 0.0
N-terminus
sp_v1.1_unigene16341 SustainPine v1.1 1411
AutoFact: Similar to YT521-B-like family domain containing protein (Fragment) n=1 Tax=Triticum aestivum RepID=D8L9K6_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubisco subunit binding-protein beta subunit-like 0.0
C-terminus
sp_v1.1_unigene21191 SustainPine v1.1 2788
AutoFact: yth domain-containing protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 0.0
Complete
sp_v1.1_unigene28261 SustainPine v1.1 1913
AutoFact: yth domain-containing protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yt521-b-like family expressed 0.0
C-terminus
sp_v1.1_unigene28964 SustainPine v1.1 1972
AutoFact: splicing factor yt521-B, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene62570 SustainPine v1.1 397
AutoFact: yth domain-containing protein, putative 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 1.80824e-34
Internal
sp_v1.1_unigene75554 SustainPine v1.1 152
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.65274e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain