Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, CCCH-type

Term: IPR000571  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11263 SustainPine v1.1 813
AutoFact: zinc finger CCCH type domain-containing protein ZFN-like 3 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.23199e-28
Internal
sp_v1.1_unigene11781 SustainPine v1.1 2214
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SGS6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene12042 SustainPine v1.1 645
AutoFact: ZFN1; ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene12479 SustainPine v1.1 1471
AutoFact: tRNA-dihydrouridine synthase, putative; K05544 tRNA-dihydrouridine synthase 3 [EC:1.-.-.-] 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dihydrouridine synthase family protein 0.0
Internal
sp_v1.1_unigene14581 SustainPine v1.1 378
AutoFact: RNA recognition motif (RRM)-containing protein 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 2.3144e-26
Internal
sp_v1.1_unigene14858 SustainPine v1.1 2026
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
Complete
sp_v1.1_unigene16192 SustainPine v1.1 1579
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 14; Short=OsC3H14 dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group] gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group] gb|EAZ22072.1| hypothetica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16901 SustainPine v1.1 1670
AutoFact: zinc finger (CCCH-type) family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 0.0
N-terminus
sp_v1.1_unigene17110 SustainPine v1.1 2480
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17641 SustainPine v1.1 497
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 1.4013e-45
Internal
sp_v1.1_unigene18983 SustainPine v1.1 826
AutoFact: nucleic acid binding / zinc ion binding 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc matrin type 5 0.0
Complete
sp_v1.1_unigene19352 SustainPine v1.1 834
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 0.0
Putative C-terminus
sp_v1.1_unigene19571 SustainPine v1.1 3015
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein ZFN-like; Pisum sativum (Garden pea). 0.0
Blast2go: zinc finger protein 0.0
Complete
sp_v1.1_unigene22399 SustainPine v1.1 790
AutoFact: Zinc finger, CCCH-type n=1 Tax=Medicago truncatula RepID=A2Q3L5_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Internal
sp_v1.1_unigene23805 SustainPine v1.1 2613
AutoFact: zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18; Short=AtC3H18 gb|AAD29054.1| hypothetical protein [Arabidop 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene25174 SustainPine v1.1 1754
AutoFact: Zinc finger CCCH domain-containing protein 14 n=2 Tax=Oryza sativa RepID=C3H14_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c3h14_orysj ame: full=zinc finger ccch domain-containing protein 14 short= 3h14 0.0
Complete
sp_v1.1_unigene26114 SustainPine v1.1 607
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RT23_RICCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger (ccch-type) family protein 0.0
C-terminus
sp_v1.1_unigene26453 SustainPine v1.1 1074
AutoFact: similar to CwfJ-like family protein / zinc finger (CCCH-type) family protein 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 59; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: like family protein zinc finger (ccch-type) family protein 0.0
C-terminus
sp_v1.1_unigene26948 SustainPine v1.1 760
AutoFact: zinc finger (CCCH-type/C3HC4-type RING finger) family protein 4.0e-23
FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger family protein 3.74687e-29
C-terminus
sp_v1.1_unigene27620 SustainPine v1.1 1192
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain