Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene38842 SustainPine v1.1 974
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v1.1_unigene38917 SustainPine v1.1 520
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RW52_RICCO 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.39572e-40
Internal
sp_v1.1_unigene39205 SustainPine v1.1 464
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g15200 dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana] 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.51999e-41
Internal
sp_v1.1_unigene39243 SustainPine v1.1 631
• AutoFact: pentatricopeptide repeat-containing protein, putative 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.72892e-20
Putative C-terminus
sp_v1.1_unigene39250 SustainPine v1.1 415
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.66022e-34
Putative C-terminus
sp_v1.1_unigene39257 SustainPine v1.1 502
• AutoFact: Unknown EST 1.0e-06
unknown
sp_v1.1_unigene39602 SustainPine v1.1 619
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R809_RICCO 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.25577e-35
Internal
sp_v1.1_unigene39724 SustainPine v1.1 208
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RM74_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.47984e-12
Internal
sp_v1.1_unigene39731 SustainPine v1.1 313
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-18
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g20740; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.44377e-21
C-terminus
sp_v1.1_unigene39769 SustainPine v1.1 470
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.15355e-41
Internal
sp_v1.1_unigene40105 SustainPine v1.1 257
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.2927e-23
Internal
sp_v1.1_unigene40255 SustainPine v1.1 405
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.82987e-40
Internal
sp_v1.1_unigene40345 SustainPine v1.1 532
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.80196e-34
Internal
sp_v1.1_unigene40373 SustainPine v1.1 584
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.93531e-23
Internal
sp_v1.1_unigene40505 SustainPine v1.1 205
• AutoFact: Ubiquitin family protein n=2 Tax=Arabidopsis RepID=D7LBJ7_ARALY 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin family protein 7.97571e-27
Internal
sp_v1.1_unigene40668 SustainPine v1.1 488
• AutoFact: Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Arabidopsis thaliana RepID=D4I6L6_ARATH 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 1.42654e-15
Internal
sp_v1.1_unigene40906 SustainPine v1.1 422
• AutoFact: pentatricopeptide repeat-containing protein, putative 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.64347e-29
Internal
sp_v1.1_unigene40920 SustainPine v1.1 541
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS03_RICCO 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene41238 SustainPine v1.1 413
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8M0_RICCO 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.08441e-27
Internal
sp_v1.1_unigene41339 SustainPine v1.1 829
• AutoFact: DOT4; DOT4 (DEFECTIVELY ORGANIZED TRIBUTARIES 4) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain