Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene34485 SustainPine v1.1 498
• AutoFact: Unknown EST 6.0e-21
unknown
sp_v1.1_unigene34570 SustainPine v1.1 495
• AutoFact: pentatricopeptide repeat-containing protein, putative 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.00189e-21
Internal
sp_v1.1_unigene34589 SustainPine v1.1 446
• AutoFact: Unknown EST 8.0e-07
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g35030, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene34715 SustainPine v1.1 409
• AutoFact: Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Arabidopsis thaliana RepID=D4I6L6_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.15394e-32
Internal
sp_v1.1_unigene34735 SustainPine v1.1 870
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQC8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v1.1_unigene34856 SustainPine v1.1 335
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.88971e-35
Internal
sp_v1.1_unigene34901 SustainPine v1.1 549
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.24208e-44
Internal
sp_v1.1_unigene34940 SustainPine v1.1 481
• AutoFact: MEE40; MEE40 (maternal effect embryo arrest 40) 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: predicted protein [Populus trichocarpa] 7.42548e-22
Putative C-terminus
sp_v1.1_unigene35035 SustainPine v1.1 526
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Putative C-terminus
sp_v1.1_unigene35259 SustainPine v1.1 401
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene35267 SustainPine v1.1 395
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-18
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g23020; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.05865e-19
Internal
sp_v1.1_unigene35285 SustainPine v1.1 1232
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
sp_v1.1_unigene35700 SustainPine v1.1 1162
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.5502e-40
N-terminus
sp_v1.1_unigene37031 SustainPine v1.1 582
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene37301 SustainPine v1.1 478
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [A 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.25839e-40
Internal
sp_v1.1_unigene37912 SustainPine v1.1 1276
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
sp_v1.1_unigene38451 SustainPine v1.1 1159
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene38568 SustainPine v1.1 549
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.98914e-41
Internal
sp_v1.1_unigene38698 SustainPine v1.1 765
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene38756 SustainPine v1.1 710
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.03104e-39
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain