Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene25945 SustainPine v1.1 838
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQC9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene26355 SustainPine v1.1 518
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Internal
sp_v1.1_unigene26444 SustainPine v1.1 479
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SMY0_RICCO 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.05385e-31
Internal
sp_v1.1_unigene26854 SustainPine v1.1 209
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: PREDICTED: hypothetical protein [Vitis vinifera] 2.09931e-11
Internal
sp_v1.1_unigene27189 SustainPine v1.1 590
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.44684e-30
Internal
sp_v1.1_unigene27239 SustainPine v1.1 497
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v1.1_unigene27256 SustainPine v1.1 561
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Putative Complete
sp_v1.1_unigene27285 SustainPine v1.1 351
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.37141e-25
Internal
sp_v1.1_unigene27441 SustainPine v1.1 520
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene27443 SustainPine v1.1 579
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene27545 SustainPine v1.1 390
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.77207e-32
Internal
sp_v1.1_unigene28170 SustainPine v1.1 2057
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene28376 SustainPine v1.1 2059
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v1.1_unigene28522 SustainPine v1.1 1790
• AutoFact: emb1796 (embryo defective 1796); ATP binding 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative Complete
sp_v1.1_unigene28670 SustainPine v1.1 327
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.17641e-24
Internal
sp_v1.1_unigene29438 SustainPine v1.1 736
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [A 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene29600 SustainPine v1.1 194
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1C7_RICCO 4.0e-15
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g39620, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.0879e-15
Internal
sp_v1.1_unigene29718 SustainPine v1.1 554
• AutoFact: Pentatricopeptide repeat n=1 Tax=Medicago truncatula RepID=Q2HSE6_MEDTR 2.0e-20
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g01570; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.36384e-20
C-terminus
sp_v1.1_unigene30295 SustainPine v1.1 592
• AutoFact: EMB975; EMB975 (EMBRYO DEFECTIVE 975) 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.40098e-35
Internal
sp_v1.1_unigene30648 SustainPine v1.1 811
• AutoFact: PGR3; PGR3 (PROTON GRADIENT REGULATION 3) 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain