Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene20135 SustainPine v1.1 407
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SMD1_RICCO 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.51217e-29
Internal
sp_v1.1_unigene20203 SustainPine v1.1 325
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.46435e-12
Internal
sp_v1.1_unigene20205 SustainPine v1.1 592
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.54206e-25
Internal
sp_v1.1_unigene20225 SustainPine v1.1 462
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RMY5_RICCO 9.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.73796e-29
Putative C-terminus
sp_v1.1_unigene20247 SustainPine v1.1 388
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.45344e-28
Putative N-terminus
sp_v1.1_unigene20354 SustainPine v1.1 312
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.43565e-28
Internal
sp_v1.1_unigene20439 SustainPine v1.1 299
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-22
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g51965, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.53159e-22
Internal
sp_v1.1_unigene20463 SustainPine v1.1 326
• AutoFact: pentatricopeptide repeat-containing protein, putative (EC:3.2.1.82) 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.19792e-14
Putative N-terminus
sp_v1.1_unigene20635 SustainPine v1.1 434
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.11253e-23
Internal
sp_v1.1_unigene20940 SustainPine v1.1 876
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus
sp_v1.1_unigene20943 SustainPine v1.1 821
• AutoFact: PREDICTED: similar to Putative callose synthase n=1 Tax=Vitis vinifera RepID=UPI000198564F 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.75444e-30
C-terminus
sp_v1.1_unigene20948 SustainPine v1.1 2298
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v1.1_unigene20968 SustainPine v1.1 1061
• AutoFact: Pentatricopeptide repeat-containing protein n=2 Tax=Arabidopsis RepID=D7L3A6_ARALY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene21042 SustainPine v1.1 2285
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative Complete
sp_v1.1_unigene21107 SustainPine v1.1 747
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HU53_MEDTR 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.4815e-38
Putative Complete
sp_v1.1_unigene21331 SustainPine v1.1 791
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SNN7_RICCO 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.37282e-39
Putative N-terminus
sp_v1.1_unigene21457 SustainPine v1.1 792
• AutoFact: Tetratricopeptide repeat, putative n=4 Tax=Oryza sativa RepID=Q53RC3_ORYSJ 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene22529 SustainPine v1.1 305
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.49859e-22
Internal
sp_v1.1_unigene23262 SustainPine v1.1 500
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene25676 SustainPine v1.1 871
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain