Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene14283 SustainPine v1.1 474
AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 8.15561e-32
Internal
sp_v1.1_unigene14664 SustainPine v1.1 810
AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v1.1_unigene17609 SustainPine v1.1 589
AutoFact: pentatricopeptide (PPR) repeat-containing protein 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.61936e-37
Internal
sp_v1.1_unigene17813 SustainPine v1.1 703
AutoFact: PPR domain containing protein 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Putative Complete
sp_v1.1_unigene18032 SustainPine v1.1 291
AutoFact: binding [Arabidopsis thaliana] sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890 dbj|BAD42891.1| putative protein [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g62890-like protein 5.38077e-15
Internal
sp_v1.1_unigene18049 SustainPine v1.1 295
AutoFact: pentatricopeptide (PPR) repeat-containing protein 9.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene18114 SustainPine v1.1 856
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
sp_v1.1_unigene18205 SustainPine v1.1 143
AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene18220 SustainPine v1.1 911
AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene18541 SustainPine v1.1 1260
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-44
Putative C-terminus
sp_v1.1_unigene18813 SustainPine v1.1 1925
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Complete
sp_v1.1_unigene18851 SustainPine v1.1 2587
AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v1.1_unigene19026 SustainPine v1.1 1323
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T7Z0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative N-terminus
sp_v1.1_unigene19427 SustainPine v1.1 355
AutoFact: pentatricopeptide repeat-containing protein, putative 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.63068e-17
Internal
sp_v1.1_unigene19473 SustainPine v1.1 1653
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SWE4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Complete
sp_v1.1_unigene19540 SustainPine v1.1 478
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SWT4_RICCO 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 4.05258e-27
Internal
sp_v1.1_unigene19588 SustainPine v1.1 318
AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.04791e-22
Internal
sp_v1.1_unigene19789 SustainPine v1.1 679
AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
sp_v1.1_unigene19845 SustainPine v1.1 295
AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.4747e-25
N-terminus
sp_v1.1_unigene19870 SustainPine v1.1 1114
AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain