Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene12191 SustainPine v1.1 691
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transferring glycosyl 0.0
Internal
sp_v1.1_unigene12237 SustainPine v1.1 511
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y0_RICCO 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.36137e-23
Putative C-terminus
sp_v1.1_unigene12251 SustainPine v1.1 563
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.54694e-23
Putative C-terminus
sp_v1.1_unigene12375 SustainPine v1.1 403
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.06982e-35
Internal
sp_v1.1_unigene12443 SustainPine v1.1 421
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1X9_RICCO 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.57731e-20
Putative C-terminus
sp_v1.1_unigene12546 SustainPine v1.1 384
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 5.25902e-39
Internal
sp_v1.1_unigene12578 SustainPine v1.1 577
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene12705 SustainPine v1.1 381
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g30780; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.18392e-24
Internal
sp_v1.1_unigene12724 SustainPine v1.1 790
• AutoFact: similar to pentatricopeptide (PPR) repeat-containing protein 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.66896e-44
C-terminus
sp_v1.1_unigene12887 SustainPine v1.1 383
• AutoFact: pentatricopeptide repeat-containing protein, putative (EC:2.3.1.74) 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.91077e-21
Internal
sp_v1.1_unigene13253 SustainPine v1.1 1002
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SFK0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene13409 SustainPine v1.1 900
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RIR9_RICCO 3.0e-35
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g21190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 4.75705e-35
C-terminus
sp_v1.1_unigene13454 SustainPine v1.1 1744
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative C-terminus
sp_v1.1_unigene13483 SustainPine v1.1 382
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520 dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.81137e-32
Internal
sp_v1.1_unigene13509 SustainPine v1.1 297
• AutoFact: Unknown EST 3.0e-32
Putative coding
sp_v1.1_unigene13743 SustainPine v1.1 577
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 65 0.0
Putative C-terminus
sp_v1.1_unigene13777 SustainPine v1.1 247
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.60578e-19
Putative N-terminus
sp_v1.1_unigene13927 SustainPine v1.1 558
• AutoFact: similar to Tetratricopeptide-like helical 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide-like helical 0.0
Putative N-terminus
sp_v1.1_unigene14249 SustainPine v1.1 217
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene14253 SustainPine v1.1 648
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3S4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain