Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene72393 SustainPine v1.1 358
• AutoFact: UDP-glucoronosyl/UDP-glucosyl transferase family protein 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: udp-glucoronosyl udp-glucosyl transferase family protein 1.97388e-25
Internal
sp_v1.1_unigene72545 SustainPine v1.1 263
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.53205e-12
Internal
sp_v1.1_unigene72585 SustainPine v1.1 259
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.13792e-20
Internal
sp_v1.1_unigene72594 SustainPine v1.1 325
• AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v1.1_unigene72702 SustainPine v1.1 304
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.53809e-28
Internal
sp_v1.1_unigene72843 SustainPine v1.1 323
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.59435e-28
N-terminus
sp_v1.1_unigene72852 SustainPine v1.1 318
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 8.15285e-19
Putative N-terminus
sp_v1.1_unigene73221 SustainPine v1.1 430
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.49645e-33
Internal
sp_v1.1_unigene73361 SustainPine v1.1 204
• AutoFact: Os03g0314400 protein n=2 Tax=Oryza sativa RepID=Q10MC4_ORYSJ 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene73401 SustainPine v1.1 429
• AutoFact: Putative pentatricopeptide repeat protein (Fragment) n=1 Tax=Gossypium raimondii RepID=B2ZAR9_GOSRA 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Internal
sp_v1.1_unigene73488 SustainPine v1.1 311
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RNU9_RICCO 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.97785e-11
Internal
sp_v1.1_unigene73909 SustainPine v1.1 396
• AutoFact: PPR domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.14599e-15
Internal
sp_v1.1_unigene73994 SustainPine v1.1 522
• AutoFact: Putative pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6Z6J3_ORYSJ 5.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g21880, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.90908e-19
Internal
sp_v1.1_unigene74179 SustainPine v1.1 186
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RFX6_RICCO 6.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene74335 SustainPine v1.1 189
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.32506e-12
Internal
sp_v1.1_unigene74646 SustainPine v1.1 182
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.3176e-15
Internal
sp_v1.1_unigene75030 SustainPine v1.1 392
• AutoFact: Pentatricopeptide repeat-containing protein n=2 Tax=Arabidopsis RepID=D7L3A6_ARALY 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.35086e-34
Internal
sp_v1.1_unigene75121 SustainPine v1.1 402
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.04731e-38
Putative Complete
sp_v1.1_unigene75129 SustainPine v1.1 333
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.72264e-25
Internal
sp_v1.1_unigene75161 SustainPine v1.1 237
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.86988e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain